Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 RANP9-201ENST00000519957 271 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 PRR13P7-201ENST00000605538 430 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 U47924.1-201ENST00000606539 434 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 uc_338.21-201ENST00000622458 147 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 SNX18P12-201ENST00000624821 759 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC140479.4-205ENST00000636339 820 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 OR2L1P-202ENST00000641567 1023 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AL161891.1-201ENST00000621575 4636 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 MFSD8-227ENST00000641393 4069 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC016251.1-201ENST00000624299 4198 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 RNU6-1032P-201ENST00000384100 107 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 RNU4-31P-201ENST00000384211 141 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 Y_RNA.552-201ENST00000384665 112 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 RN7SKP206-201ENST00000410823 293 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 RNU6-370P-201ENST00000411008 104 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AL158073.1-201ENST00000426848 1104 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 MRPS31P2-201ENST00000451581 518 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 MEMO1P3-201ENST00000459811 302 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC013356.1-201ENST00000489027 564 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC233724.1-201ENST00000503894 233 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 RNU6-1143P-201ENST00000516125 104 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 OR5B10P-201ENST00000532869 642 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 BNIP3P6-201ENST00000549284 499 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC079598.4-201ENST00000549647 265 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 CYP4A44P-201ENST00000569984 154 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AL158151.4-201ENST00000600965 507 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AL592436.1-201ENST00000605135 558 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC245389.1-201ENST00000605141 529 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 RNU6-87P-201ENST00000607561 108 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC062037.2-201ENST00000610137 73 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AL162373.1-201ENST00000620433 407 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 AC068213.1-201ENST00000625124 226 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LRCH3Q96II8 AL365475.1-201ENST00000565135 1949 ntBASIC7.93□□□□□ -1.14
LRCH3Q96II8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.93□□□□□ -1.14
LRCH3Q96II8 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms