Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RFT1Q96AA3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 RNU6-666P-201ENST00000363499 107 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 GAPDHP42-201ENST00000406848 981 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 RN7SKP125-201ENST00000410481 302 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 OR6E1P-201ENST00000414424 923 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC009302.1-201ENST00000417147 390 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC023141.6-201ENST00000429418 337 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 GSTM5P1-201ENST00000434751 660 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC074367.1-201ENST00000438685 1125 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 SUMO2P1-206ENST00000445436 284 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 CASP3P1-201ENST00000446037 609 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 MRPL35P2-201ENST00000448009 511 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC107398.1-201ENST00000486904 505 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 RN7SL814P-201ENST00000487715 300 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 RN7SL649P-201ENST00000496974 275 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC025459.1-201ENST00000504072 156 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC073358.1-201ENST00000505671 684 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 MTND3P24-201ENST00000506306 329 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 RNA5SP228-201ENST00000516232 133 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 SCARNA16.4-201ENST00000516956 187 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 HAUS1P3-201ENST00000523909 662 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL049872.1-201ENST00000556323 322 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 SS18L2P2-201ENST00000583960 235 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL499605.1-201ENST00000604628 403 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC011472.4-201ENST00000615848 491 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC009704.2-201ENST00000618739 483 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC090617.9-201ENST00000623751 147 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AP003400.3-201ENST00000624904 346 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL596275.2-204ENST00000641628 552 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL596275.2-206ENST00000641957 626 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 ZNF90P1-201ENST00000480493 1951 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AC010329.2-201ENST00000595195 2737 ntBASIC4.61□□□□□ -1.67
RFT1Q96AA3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
RFT1Q96AA3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RFT1Q96AA3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 RNU6-244P-201ENST00000391028 104 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 TAF9BP2-201ENST00000400856 499 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 RNA5SP498-201ENST00000411342 120 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 HMGN1P20-201ENST00000411849 300 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AL590609.2-201ENST00000421430 368 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 IPPKP1-201ENST00000422501 768 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 DPY19L1P2-201ENST00000426647 915 ntBASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.6□□□□□ -1.67
RFT1Q96AA3 AL590762.3-201ENST00000436372 640 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms