Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP001437.1-201ENST00000608783 456 ntBASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 AL136097.3-201ENST00000611097 505 ntBASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SHKBP1Q8TBC3 AC091305.2-201ENST00000624049 1576 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 EPS15P1-202ENST00000459691 2071 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 COX6B1P3-201ENST00000312310 260 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 OR1L1-202ENST00000373686 1083 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.453-201ENST00000384223 109 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC004386.1-201ENST00000393214 761 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AL589994.1-201ENST00000404962 340 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AL590004.1-201ENST00000405321 300 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 RPS15AP38-201ENST00000413110 372 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC233728.2-201ENST00000425348 757 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 RN7SL643P-201ENST00000471845 291 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 OR7E99P-201ENST00000505750 922 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC022483.1-201ENST00000514020 567 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 MRPS21P8-201ENST00000569196 235 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.812-201ENST00000610788 101 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.784-201ENST00000613803 101 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.787-201ENST00000616522 101 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.780-201ENST00000617336 101 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.801-201ENST00000619005 101 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 AC073862.4-201ENST00000622982 854 ntBASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SHKBP1Q8TBC3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 AL355377.1-201ENST00000621125 1653 ntBASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 TEX21P-201ENST00000447107 1476 ntBASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 AP002001.2-201ENST00000529025 1469 ntBASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 AC000367.1-201ENST00000452711 1766 ntBASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 LYARP1-201ENST00000436977 1501 ntBASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SHKBP1Q8TBC3 Y_RNA.9-201ENST00000362354 101 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms