Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 MIR4278-201ENST00000636094 69 ntBASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 AC006511.3-201ENST00000624929 1783 ntBASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNPOQ8N3V7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC034229.2-201ENST00000566945 2508 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 SNORA43.1-201ENST00000364863 140 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 SNORA51.12-201ENST00000384448 134 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 RNU2-42P-201ENST00000410697 113 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 RNU6-272P-201ENST00000411028 104 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL096829.1-201ENST00000413677 457 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL161449.1-201ENST00000414531 1199 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL593851.1-201ENST00000426171 157 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL163193.1-201ENST00000444895 788 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 ZNF619P1-201ENST00000446539 752 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 MTND1P16-201ENST00000465177 898 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC005912.1-201ENST00000495392 255 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC008945.1-201ENST00000505144 499 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC048346.1-201ENST00000510247 144 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC109445.1-201ENST00000512356 383 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 TCP11X3P-202ENST00000514289 1254 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC090819.1-201ENST00000523800 1111 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 RPA2P3-201ENST00000533268 770 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 GTF2IP8-201ENST00000560687 584 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC090888.1-201ENST00000561335 1141 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL589674.2-201ENST00000604304 337 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AP005431.1-201ENST00000618479 319 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AL357562.1-201ENST00000624911 609 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 CDRT1-208ENST00000630868 794 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC005539.1-201ENST00000443768 1479 ntBASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNPOQ8N3V7 MAPK10-287ENST00000641217 3037 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AP000776.1-201ENST00000530032 1663 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SNORA70H-201ENST00000383910 135 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SNORA70J-201ENST00000384182 135 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 SNORD116-1-201ENST00000384335 95 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AL161909.1-201ENST00000397390 712 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 AC016739.1-201ENST00000405359 345 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 RNA5SP80-201ENST00000410475 111 ntBASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNPOQ8N3V7 RPL35AP3-201ENST00000414680 288 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms