Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC107982.3-201ENST00000584957 985 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 ZNF812P-201ENST00000457674 1694 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 RPL37P1-201ENST00000432310 284 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 FKBP1BP1-201ENST00000553366 325 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 SNORA51-201ENST00000606420 132 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC092647.1-201ENST00000420654 287 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC069157.1-201ENST00000421749 137 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AL049830.4-201ENST00000555149 351 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 MIR7151-201ENST00000617477 60 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC009093.8-201ENST00000641769 292 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC073342.2-201ENST00000595842 1800 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AC018765.1-201ENST00000623357 3446 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS13CQ709C8 AL731532.1-201ENST00000623972 4236 ntBASIC3.7□□□□□ -1.82
VPS13CQ709C8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS13CQ709C8 RN7SKP177-201ENST00000410567 355 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 CYCSP43-201ENST00000438233 310 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 UQCRC2P1-201ENST00000417777 1332 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 RN7SKP235-201ENST00000410662 305 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC040958.1-201ENST00000561102 201 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC026367.3-201ENST00000619032 590 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 RNA5SP124-201ENST00000362739 110 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 RGS17P1-201ENST00000423358 553 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AC069061.3-201ENST00000582254 823 ntBASIC3.69□□□□□ -1.82
VPS13CQ709C8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS13CQ709C8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS13CQ709C8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms