Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC092747.4-201ENST00000620519 1861 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 RNU1-146P-201ENST00000364015 165 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 RNA5SP455-201ENST00000365190 119 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 RNU6-398P-201ENST00000384143 109 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 RNU6-1000P-201ENST00000391066 106 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 U3.23-201ENST00000391132 200 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 COX6CP17-201ENST00000421389 185 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 MORF4L1P7-201ENST00000426038 703 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 MTND2P21-201ENST00000436242 1042 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 MED28P3-201ENST00000444288 531 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 MOB1AP2-201ENST00000446060 614 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC096741.1-201ENST00000472250 846 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 RN7SL423P-201ENST00000486202 304 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC103833.1-201ENST00000517442 172 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC021006.3-201ENST00000530771 192 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 MIR4270-201ENST00000581799 70 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 MIR4691-201ENST00000583764 85 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 AC099654.9-201ENST00000637055 678 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 OR4F13P-202ENST00000560066 2054 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 IRF5P1-201ENST00000504852 2164 ntBASIC6.52□□□□□ -1.37
CCDC93Q567U6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
CCDC93Q567U6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC93Q567U6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 AL356317.1-201ENST00000396110 1436 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 OR9K1P-202ENST00000641111 3217 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC016745.2-201ENST00000608834 3443 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 SNORA5.1-201ENST00000384275 131 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 ST13P16-201ENST00000401760 781 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AL133482.1-201ENST00000415988 498 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 CHEK2P3-201ENST00000416118 248 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC019050.1-201ENST00000418508 492 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 RIMKLBP2-201ENST00000424737 654 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC138761.5-201ENST00000433967 325 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 RPL12P39-201ENST00000455456 496 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC105918.1-201ENST00000474399 838 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 OR9N1P-202ENST00000494289 481 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 FABP5P6-201ENST00000510588 409 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 RNU6-334P-201ENST00000517072 102 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC008147.3-201ENST00000548666 354 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC092868.3-201ENST00000560515 784 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 RN7SL339P-201ENST00000580597 296 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 RN7SL356P-201ENST00000582228 248 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 MIR4737-201ENST00000583979 81 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC005252.1-201ENST00000604518 1063 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AL592494.3-201ENST00000609485 464 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC095038.2-201ENST00000621464 1070 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 AC004808.1-201ENST00000627671 721 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 TMEM30CP-203ENST00000637814 1035 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 NXF4-202ENST00000416098 1465 ntBASIC6.51□□□□□ -1.37
CCDC93Q567U6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC93Q567U6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC93Q567U6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms