Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC107952.2-201ENST00000606048 486 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC007349.4-201ENST00000608114 532 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AL592148.2-201ENST00000612210 372 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AP002967.1-201ENST00000624203 539 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC079416.3-201ENST00000624479 549 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC092079.1-201ENST00000558620 1985 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 PWAR1-201ENST00000624188 2414 ntBASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC144BQ3MJ40 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC232271.1-201ENST00000602455 2715 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 RN7SKP160-201ENST00000363804 340 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 SNORA51.12-201ENST00000384448 134 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 PTCD2P2-201ENST00000415579 1095 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC073069.1-201ENST00000428657 441 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 DEFA9P-201ENST00000433042 285 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 MTATP6P26-201ENST00000445926 662 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC007327.1-201ENST00000447461 264 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AL162739.1-201ENST00000450606 307 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC093166.2-201ENST00000455969 1017 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC008629.2-201ENST00000503783 483 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 COX6B1P6-201ENST00000522347 255 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 VBP1-203ENST00000535916 944 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC044913.1-201ENST00000557200 430 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 VN1R83P-201ENST00000595685 445 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AP000238.1-201ENST00000608759 426 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 AC099654.6-201ENST00000636487 512 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 PARP4P2-201ENST00000446672 3326 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 GTF2IP4-201ENST00000453092 2054 ntBASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC144BQ3MJ40 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC004076.2-201ENST00000620532 3323 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 OR10R3P-201ENST00000361688 942 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 RNU6-304P-201ENST00000364855 107 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 HMGB1P20-201ENST00000402555 677 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 RN7SKP59-201ENST00000410520 314 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 NMD3P2-201ENST00000421815 761 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AC127526.2-201ENST00000426436 775 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 NANOGP4-201ENST00000427230 913 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 FAM96AP1-201ENST00000430879 482 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 HMGB1P45-201ENST00000435986 653 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 TPTE2P6-202ENST00000445572 1007 ntBASIC6.74□□□□□ -1.33
CCDC144BQ3MJ40 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms