Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 AL354854.1-201ENST00000455940 1363 ntBASIC4.94□□□□□ -1.62
SOX2P48431 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX2P48431 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX2P48431 OR5H2-201ENST00000355273 945 ntBASIC4.94□□□□□ -1.62
SOX2P48431 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SOX2P48431 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-543P-201ENST00000362576 108 ntBASIC4.94□□□□□ -1.62
SOX2P48431 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX2P48431 MIR130B-202ENST00000385018 82 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-1320P-201ENST00000390838 107 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-1269P-201ENST00000391139 107 ntBASIC4.94□□□□□ -1.62
SOX2P48431 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 SFR1P1-201ENST00000403720 688 ntBASIC4.94□□□□□ -1.62
SOX2P48431 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.94□□□□□ -1.62
SOX2P48431 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AL354890.1-201ENST00000413730 346 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX2P48431 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 MFSD13B-201ENST00000420133 1290 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RPF2P1-201ENST00000424137 906 ntBASIC4.94□□□□□ -1.62
SOX2P48431 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX2P48431 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX2P48431 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 GAPDHP59-201ENST00000435908 267 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 AL008629.1-201ENST00000438615 184 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 AC005077.1-201ENST00000449226 375 ntBASIC4.94□□□□□ -1.62
SOX2P48431 HMGB1P7-201ENST00000450921 612 ntBASIC4.94□□□□□ -1.62
SOX2P48431 NPM1P13-201ENST00000452663 865 ntBASIC4.94□□□□□ -1.62
SOX2P48431 GEMIN2P1-201ENST00000454246 752 ntBASIC4.94□□□□□ -1.62
SOX2P48431 NXT1P1-201ENST00000458481 316 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-599P-201ENST00000459383 107 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-1193P-201ENST00000459461 107 ntBASIC4.94□□□□□ -1.62
SOX2P48431 BET1P1-201ENST00000482276 359 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC104687.1-201ENST00000485829 412 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RPL29P23-201ENST00000486188 442 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RN7SL57P-201ENST00000493687 290 ntBASIC4.94□□□□□ -1.62
SOX2P48431 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 AC111193.1-201ENST00000504097 155 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX2P48431 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 RN7SKP238-201ENST00000516483 249 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RNU5A-4P-201ENST00000516588 111 ntBASIC4.94□□□□□ -1.62
SOX2P48431 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 AC083923.1-201ENST00000523708 376 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AP000926.4-201ENST00000527351 454 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 AC092332.1-201ENST00000563684 829 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC096996.1-201ENST00000563813 325 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 MIR4776-2-201ENST00000580204 80 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX2P48431 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX2P48431 AP001542.2-201ENST00000593141 364 ntBASIC4.94□□□□□ -1.62
SOX2P48431 VN1R83P-201ENST00000595685 445 ntBASIC4.94□□□□□ -1.62
SOX2P48431 COX6CP7-201ENST00000597056 208 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC124856.1-201ENST00000600819 896 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AL139124.1-201ENST00000609123 421 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC010632.3-201ENST00000611377 369 ntBASIC4.94□□□□□ -1.62
SOX2P48431 MIR6774-201ENST00000614651 70 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC139769.3-201ENST00000618383 175 ntBASIC4.94□□□□□ -1.62
SOX2P48431 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-368P-201ENST00000620928 107 ntBASIC4.94□□□□□ -1.62
SOX2P48431 AC131159.1-201ENST00000621854 213 ntBASIC4.94□□□□□ -1.62
SOX2P48431 RNU6-538P-201ENST00000622329 107 ntBASIC4.94□□□□□ -1.62
SOX2P48431 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX2P48431 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.94□□□□□ -1.62
SOX2P48431 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 MIR3974-201ENST00000637126 96 ntBASIC4.94□□□□□ -1.62
SOX2P48431 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.94□□□□□ -1.62
SOX2P48431 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX2P48431 AL034546.1-201ENST00000623740 3693 ntBASIC4.93□□□□□ -1.62
SOX2P48431 AC079097.1-201ENST00000512187 1399 ntBASIC4.93□□□□□ -1.62
SOX2P48431 CCT8P1-201ENST00000413611 1657 ntBASIC4.93□□□□□ -1.62
SOX2P48431 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX2P48431 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX2P48431 RNU6-413P-201ENST00000384115 107 ntBASIC4.93□□□□□ -1.62
SOX2P48431 GCNT1P4-201ENST00000404096 329 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms