Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TCEA1P3-201ENST00000443005 880 ntBASIC5.38□□□□□ -1.55
HADHAP40939 AC099063.2-201ENST00000446360 662 ntBASIC5.38□□□□□ -1.55
HADHAP40939 HMGB1P26-201ENST00000452520 628 ntBASIC5.38□□□□□ -1.55
HADHAP40939 RPL7P45-201ENST00000455851 743 ntBASIC5.38□□□□□ -1.55
HADHAP40939 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 RPS26P39-201ENST00000469206 341 ntBASIC5.38□□□□□ -1.55
HADHAP40939 RPL35AP19-201ENST00000469425 329 ntBASIC5.38□□□□□ -1.55
HADHAP40939 SIAH1P1-201ENST00000479411 923 ntBASIC5.38□□□□□ -1.55
HADHAP40939 AC107398.1-201ENST00000486904 505 ntBASIC5.38□□□□□ -1.55
HADHAP40939 AC008638.1-201ENST00000506035 866 ntBASIC5.38□□□□□ -1.55
HADHAP40939 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.38□□□□□ -1.55
HADHAP40939 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.38□□□□□ -1.55
HADHAP40939 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 VTA1P2-201ENST00000520205 911 ntBASIC5.38□□□□□ -1.55
HADHAP40939 IGLV2-28-201ENST00000520681 304 ntBASIC5.38□□□□□ -1.55
HADHAP40939 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.38□□□□□ -1.55
HADHAP40939 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HADHAP40939 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HADHAP40939 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.38□□□□□ -1.55
HADHAP40939 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.38□□□□□ -1.55
HADHAP40939 MIR4489-201ENST00000578869 62 ntBASIC5.38□□□□□ -1.55
HADHAP40939 PRPF19P1-201ENST00000584766 898 ntBASIC5.38□□□□□ -1.55
HADHAP40939 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 MIR6839-201ENST00000620425 113 ntBASIC5.38□□□□□ -1.55
HADHAP40939 FRG1DP-201ENST00000635586 771 ntBASIC5.38□□□□□ -1.55
HADHAP40939 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HADHAP40939 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 BX005019.1-201ENST00000561881 1810 ntBASIC5.38□□□□□ -1.55
HADHAP40939 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HADHAP40939 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HADHAP40939 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HADHAP40939 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
HADHAP40939 TCP1P3-201ENST00000414406 1498 ntBASIC5.38□□□□□ -1.55
HADHAP40939 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HADHAP40939 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HADHAP40939 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HADHAP40939 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 RN7SKP162-201ENST00000363605 345 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AC007618.1-201ENST00000366455 732 ntBASIC5.37□□□□□ -1.55
HADHAP40939 HSPA8P15-201ENST00000401676 786 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AL133388.1-201ENST00000404509 287 ntBASIC5.37□□□□□ -1.55
HADHAP40939 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.37□□□□□ -1.55
HADHAP40939 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 NPM1P4-201ENST00000414095 812 ntBASIC5.37□□□□□ -1.55
HADHAP40939 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.37□□□□□ -1.55
HADHAP40939 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.37□□□□□ -1.55
HADHAP40939 RPL34P26-201ENST00000445636 354 ntBASIC5.37□□□□□ -1.55
HADHAP40939 CASP3P1-201ENST00000446037 609 ntBASIC5.37□□□□□ -1.55
HADHAP40939 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 AC079168.1-201ENST00000458741 345 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AL133445.1-201ENST00000467051 452 ntBASIC5.37□□□□□ -1.55
HADHAP40939 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 RPL7P40-201ENST00000481703 745 ntBASIC5.37□□□□□ -1.55
HADHAP40939 COX6B1P2-201ENST00000489624 230 ntBASIC5.37□□□□□ -1.55
HADHAP40939 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.37□□□□□ -1.55
HADHAP40939 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.37□□□□□ -1.55
HADHAP40939 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 HIGD1AP18-201ENST00000520730 278 ntBASIC5.37□□□□□ -1.55
HADHAP40939 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 HMGB1P40-201ENST00000525121 540 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AP004607.2-201ENST00000533949 322 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.37□□□□□ -1.55
HADHAP40939 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.37□□□□□ -1.55
HADHAP40939 AC006349.1-201ENST00000555526 235 ntBASIC5.37□□□□□ -1.55
HADHAP40939 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.37□□□□□ -1.55
HADHAP40939 SUGT1P3-202ENST00000604259 383 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AC005252.1-201ENST00000604518 1063 ntBASIC5.37□□□□□ -1.55
HADHAP40939 AC007342.8-201ENST00000623278 678 ntBASIC5.37□□□□□ -1.55
HADHAP40939 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.37□□□□□ -1.55
HADHAP40939 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.37□□□□□ -1.55
HADHAP40939 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HADHAP40939 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HADHAP40939 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.37□□□□□ -1.55
HADHAP40939 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.36□□□□□ -1.55
HADHAP40939 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HADHAP40939 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.36□□□□□ -1.55
HADHAP40939 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms