Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC026979.4-201ENST00000606555 645 ntBASIC4.81□□□□□ -1.64
RPA3P35244 AC068870.2-201ENST00000620635 389 ntBASIC4.81□□□□□ -1.64
RPA3P35244 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPA3P35244 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPA3P35244 AC133552.1-201ENST00000569988 4007 ntBASIC4.81□□□□□ -1.64
RPA3P35244 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
RPA3P35244 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPA3P35244 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPA3P35244 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.81□□□□□ -1.64
RPA3P35244 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPA3P35244 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RPA3P35244 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPA3P35244 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.81□□□□□ -1.64
RPA3P35244 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.8□□□□□ -1.64
RPA3P35244 AL513548.1-201ENST00000562904 1724 ntBASIC4.8□□□□□ -1.64
RPA3P35244 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RPA3P35244 AC092435.4-201ENST00000623012 4159 ntBASIC4.8□□□□□ -1.64
RPA3P35244 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
RPA3P35244 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPA3P35244 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 RN7SKP104-201ENST00000362605 328 ntBASIC4.8□□□□□ -1.64
RPA3P35244 RNU1-20P-201ENST00000363314 162 ntBASIC4.8□□□□□ -1.64
RPA3P35244 AL645927.1-201ENST00000396783 406 ntBASIC4.8□□□□□ -1.64
RPA3P35244 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.8□□□□□ -1.64
RPA3P35244 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.8□□□□□ -1.64
RPA3P35244 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.8□□□□□ -1.64
RPA3P35244 OR6C64P-201ENST00000419708 825 ntBASIC4.8□□□□□ -1.64
RPA3P35244 OR2AM1P-201ENST00000422137 422 ntBASIC4.8□□□□□ -1.64
RPA3P35244 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.8□□□□□ -1.64
RPA3P35244 AL451139.1-201ENST00000434718 346 ntBASIC4.8□□□□□ -1.64
RPA3P35244 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.8□□□□□ -1.64
RPA3P35244 RPL37AP8-201ENST00000494116 276 ntBASIC4.8□□□□□ -1.64
RPA3P35244 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.8□□□□□ -1.64
RPA3P35244 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.8□□□□□ -1.64
RPA3P35244 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.8□□□□□ -1.64
RPA3P35244 AL049839.1-201ENST00000556151 657 ntBASIC4.8□□□□□ -1.64
RPA3P35244 AC209154.1-201ENST00000582156 337 ntBASIC4.8□□□□□ -1.64
RPA3P35244 AC091979.2-201ENST00000607514 214 ntBASIC4.8□□□□□ -1.64
RPA3P35244 MIR7155-201ENST00000615925 56 ntBASIC4.8□□□□□ -1.64
RPA3P35244 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.8□□□□□ -1.64
RPA3P35244 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPA3P35244 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
RPA3P35244 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
RPA3P35244 SOCS5P3-201ENST00000425115 1576 ntBASIC4.79□□□□□ -1.64
RPA3P35244 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RPA3P35244 MAPK10-263ENST00000641052 4307 ntBASIC4.79□□□□□ -1.64
RPA3P35244 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
RPA3P35244 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 AL589647.1-201ENST00000402485 466 ntBASIC4.79□□□□□ -1.64
RPA3P35244 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 RPL7P57-201ENST00000423238 740 ntBASIC4.79□□□□□ -1.64
RPA3P35244 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.79□□□□□ -1.64
RPA3P35244 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.79□□□□□ -1.64
RPA3P35244 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.79□□□□□ -1.64
RPA3P35244 AC104651.2-201ENST00000447549 528 ntBASIC4.79□□□□□ -1.64
RPA3P35244 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.79□□□□□ -1.64
RPA3P35244 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
RPA3P35244 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 RNA5SP392-201ENST00000516905 112 ntBASIC4.79□□□□□ -1.64
RPA3P35244 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.79□□□□□ -1.64
RPA3P35244 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.79□□□□□ -1.64
RPA3P35244 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.79□□□□□ -1.64
RPA3P35244 AC093249.4-201ENST00000564755 259 ntBASIC4.79□□□□□ -1.64
RPA3P35244 AC011487.3-201ENST00000593607 453 ntBASIC4.79□□□□□ -1.64
RPA3P35244 AL356752.1-201ENST00000615844 593 ntBASIC4.79□□□□□ -1.64
RPA3P35244 AL359757.1-201ENST00000623176 255 ntBASIC4.79□□□□□ -1.64
RPA3P35244 AL353662.3-201ENST00000625131 237 ntBASIC4.79□□□□□ -1.64
RPA3P35244 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.79□□□□□ -1.64
RPA3P35244 EOGT-210ENST00000615922 1931 ntBASIC4.79□□□□□ -1.64
RPA3P35244 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RPA3P35244 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPA3P35244 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RPA3P35244 DDX18P6-201ENST00000450119 1997 ntBASIC4.78□□□□□ -1.64
RPA3P35244 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RPA3P35244 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPA3P35244 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPA3P35244 MTCO1P7-201ENST00000419523 1542 ntBASIC4.78□□□□□ -1.64
RPA3P35244 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPA3P35244 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RPA3P35244 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RPA3P35244 RNA5SP123-201ENST00000363244 119 ntBASIC4.78□□□□□ -1.64
RPA3P35244 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RPA3P35244 RNA5SP372-201ENST00000390836 115 ntBASIC4.78□□□□□ -1.64
RPA3P35244 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPA3P35244 AL645733.1-201ENST00000402250 217 ntBASIC4.78□□□□□ -1.64
RPA3P35244 CHEK2P3-201ENST00000416118 248 ntBASIC4.78□□□□□ -1.64
RPA3P35244 AC004448.2-201ENST00000422360 586 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms