Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC004057.1-201ENST00000485827 348 ntBASIC3.43□□□□□ -1.86
CKS2P33552 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC3.43□□□□□ -1.86
CKS2P33552 RN7SL214P-201ENST00000487317 265 ntBASIC3.43□□□□□ -1.86
CKS2P33552 RN7SL244P-201ENST00000493405 297 ntBASIC3.43□□□□□ -1.86
CKS2P33552 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CKS2P33552 AC112184.1-201ENST00000505179 312 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AC090151.1-201ENST00000520784 730 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AC112191.2-201ENST00000522428 333 ntBASIC3.43□□□□□ -1.86
CKS2P33552 DYNLL1P4-201ENST00000549314 266 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AC126177.5-201ENST00000549599 178 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.43□□□□□ -1.86
CKS2P33552 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.43□□□□□ -1.86
CKS2P33552 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.43□□□□□ -1.86
CKS2P33552 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS2P33552 AP005119.2-201ENST00000579735 1105 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS2P33552 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.43□□□□□ -1.86
CKS2P33552 AL138895.2-201ENST00000603019 178 ntBASIC3.43□□□□□ -1.86
CKS2P33552 SUGT1P3-202ENST00000604259 383 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS2P33552 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.43□□□□□ -1.86
CKS2P33552 AL591926.8-201ENST00000616876 211 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS2P33552 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CKS2P33552 AC007204.1-201ENST00000621794 555 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AL353662.3-201ENST00000625131 237 ntBASIC3.43□□□□□ -1.86
CKS2P33552 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CKS2P33552 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS2P33552 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.43□□□□□ -1.86
CKS2P33552 VN2R3P-201ENST00000422626 1412 ntBASIC3.43□□□□□ -1.86
CKS2P33552 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.43□□□□□ -1.86
CKS2P33552 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CKS2P33552 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CKS2P33552 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CKS2P33552 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CKS2P33552 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CKS2P33552 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.43□□□□□ -1.86
CKS2P33552 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CKS2P33552 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS2P33552 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CKS2P33552 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS2P33552 RNA5SP52-201ENST00000362448 134 ntBASIC3.42□□□□□ -1.86
CKS2P33552 RN7SKP124-201ENST00000364730 341 ntBASIC3.42□□□□□ -1.86
CKS2P33552 RNA5SP22-201ENST00000365393 109 ntBASIC3.42□□□□□ -1.86
CKS2P33552 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS2P33552 RNA5SP345-201ENST00000410646 108 ntBASIC3.42□□□□□ -1.86
CKS2P33552 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 AC012075.1-201ENST00000436549 580 ntBASIC3.42□□□□□ -1.86
CKS2P33552 KNOP1P3-201ENST00000446933 426 ntBASIC3.42□□□□□ -1.86
CKS2P33552 RPS27AP15-201ENST00000447672 466 ntBASIC3.42□□□□□ -1.86
CKS2P33552 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS2P33552 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS2P33552 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 AC025445.1-201ENST00000502728 300 ntBASIC3.42□□□□□ -1.86
CKS2P33552 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS2P33552 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.42□□□□□ -1.86
CKS2P33552 IGLV3-26-201ENST00000520756 302 ntBASIC3.42□□□□□ -1.86
CKS2P33552 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.42□□□□□ -1.86
CKS2P33552 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS2P33552 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.42□□□□□ -1.86
CKS2P33552 AC093249.4-201ENST00000564755 259 ntBASIC3.42□□□□□ -1.86
CKS2P33552 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC3.42□□□□□ -1.86
CKS2P33552 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS2P33552 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS2P33552 AC010424.2-201ENST00000607594 443 ntBASIC3.42□□□□□ -1.86
CKS2P33552 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS2P33552 AL138721.1-201ENST00000616756 179 ntBASIC3.42□□□□□ -1.86
CKS2P33552 AC090527.3-201ENST00000619041 548 ntBASIC3.42□□□□□ -1.86
CKS2P33552 AL591926.1-201ENST00000620542 217 ntBASIC3.42□□□□□ -1.86
CKS2P33552 AP003499.2-201ENST00000624100 483 ntBASIC3.42□□□□□ -1.86
CKS2P33552 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.42□□□□□ -1.86
CKS2P33552 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CKS2P33552 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.42□□□□□ -1.86
CKS2P33552 TLK1P1-201ENST00000456760 2440 ntBASIC3.42□□□□□ -1.86
CKS2P33552 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CKS2P33552 A2MP1-204ENST00000566278 4130 ntBASIC3.42□□□□□ -1.86
CKS2P33552 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CKS2P33552 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CKS2P33552 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CKS2P33552 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.41□□□□□ -1.86
CKS2P33552 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CKS2P33552 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CKS2P33552 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CKS2P33552 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CKS2P33552 AC067945.1-201ENST00000342609 618 ntBASIC3.41□□□□□ -1.86
CKS2P33552 RN7SKP275-201ENST00000364626 301 ntBASIC3.41□□□□□ -1.86
CKS2P33552 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CKS2P33552 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CKS2P33552 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CKS2P33552 RN7SKP59-201ENST00000410520 314 ntBASIC3.41□□□□□ -1.86
CKS2P33552 RN7SKP126-201ENST00000411143 300 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms