Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 MIR4660-201ENST00000583549 74 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC245128.3-201ENST00000594721 748 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC002069.2-201ENST00000603580 883 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AL391834.1-201ENST00000609609 560 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC099494.2-201ENST00000623371 978 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AP003497.2-201ENST00000624220 967 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 SAMMSON-227ENST00000642114 1199 ntBASIC5.17□□□□□ -1.58
HLA-DPA1P20036 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DPA1P20036 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RNU6-666P-201ENST00000363499 107 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RNU6-304P-201ENST00000364855 107 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 SNORA2.3-201ENST00000383920 135 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RNU6-31P-201ENST00000384388 108 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RNU4-34P-201ENST00000410431 124 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AC004980.3-201ENST00000447046 365 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RN7SL443P-201ENST00000464331 290 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RN7SL441P-201ENST00000492388 296 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AC008638.1-201ENST00000506035 866 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RNU6-347P-201ENST00000516658 105 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 RNU6-1308P-201ENST00000516817 103 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 OR10G5P-201ENST00000532733 358 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AC013244.1-201ENST00000604279 193 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 AC020763.5-201ENST00000623298 430 ntBASIC5.16□□□□□ -1.58
HLA-DPA1P20036 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DPA1P20036 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.58
HLA-DPA1P20036 AP000542.2-201ENST00000623199 6179 ntBASIC5.15□□□□□ -1.58
HLA-DPA1P20036 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.15□□□□□ -1.58
HLA-DPA1P20036 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DPA1P20036 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DPA1P20036 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.15□□□□□ -1.58
HLA-DPA1P20036 AC011755.1-201ENST00000623763 2049 ntBASIC5.15□□□□□ -1.58
HLA-DPA1P20036 AC090017.1-201ENST00000548612 1779 ntBASIC5.15□□□□□ -1.58
HLA-DPA1P20036 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 RNU4-44P-201ENST00000363050 141 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AL035696.2-201ENST00000407941 709 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 RN7SKP278-201ENST00000410504 342 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 DDX39BP1-205ENST00000422507 192 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AL445528.1-201ENST00000426330 420 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 MRPS33P4-201ENST00000434892 317 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 MTND6P18-201ENST00000439477 513 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 AC245517.2-201ENST00000442890 346 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DPA1P20036 CCDC75P1-201ENST00000469247 791 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 RN7SL222P-201ENST00000476452 299 ntBASIC5.15□□□□□ -1.59
HLA-DPA1P20036 NIFKP7-201ENST00000503365 834 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms