Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.86□□□□□ -1.31
NFKB1P19838 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.86□□□□□ -1.31
NFKB1P19838 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.86□□□□□ -1.31
NFKB1P19838 MIR378C-201ENST00000578683 81 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.86□□□□□ -1.31
NFKB1P19838 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.86□□□□□ -1.31
NFKB1P19838 RNU6-88P-201ENST00000606801 100 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 Z98200.1-201ENST00000607298 470 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 AC005332.6-201ENST00000613178 446 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 AC068880.5-201ENST00000624331 290 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 AC006453.3-201ENST00000635891 377 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 SAMMSON-227ENST00000642114 1199 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.86□□□□□ -1.31
NFKB1P19838 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 AC007485.2-201ENST00000623493 1667 ntBASIC6.86□□□□□ -1.31
NFKB1P19838 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.86□□□□□ -1.31
NFKB1P19838 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NFKB1P19838 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 AL591848.4-201ENST00000567832 3472 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC104162.1-201ENST00000430831 2382 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 Y_RNA.97-201ENST00000363094 102 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 AL139100.1-201ENST00000408001 498 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 RANP6-201ENST00000413691 644 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 AL713922.1-201ENST00000416477 747 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 RPS3AP9-201ENST00000417027 792 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 RPL18AP14-201ENST00000417685 526 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AL157884.1-201ENST00000424561 454 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 SKP1P3-201ENST00000429280 487 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 RPL7P29-201ENST00000437151 728 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 RPL7P11-201ENST00000437586 658 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 PFN1P11-201ENST00000445829 389 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 DNAJB5P1-201ENST00000454004 806 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 UOX-201ENST00000471089 899 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 EIF3LP3-201ENST00000495197 822 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 FGF7P4-201ENST00000509595 295 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 AP005902.2-201ENST00000518393 307 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC103855.4-201ENST00000533158 265 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.85□□□□□ -1.31
NFKB1P19838 OR5AN2P-201ENST00000534535 896 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC011611.6-201ENST00000547483 255 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.85□□□□□ -1.31
NFKB1P19838 MIR5697-201ENST00000578045 78 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 MIR378H-201ENST00000579966 83 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.85□□□□□ -1.31
NFKB1P19838 SUGT1P3-202ENST00000604259 383 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AL035413.2-201ENST00000604801 525 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.85□□□□□ -1.31
NFKB1P19838 AC093591.3-201ENST00000634516 308 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.85□□□□□ -1.31
NFKB1P19838 UGT2B27P-201ENST00000505092 1620 ntBASIC6.85□□□□□ -1.31
NFKB1P19838 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NFKB1P19838 AC020658.2-201ENST00000559030 4020 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms