Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 UGT2B26P-201ENST00000508672 1613 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
SPTA1P02549 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SPTA1P02549 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.43□□□□□ -1.7
SPTA1P02549 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
SPTA1P02549 MIR449B-201ENST00000384995 97 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.43□□□□□ -1.7
SPTA1P02549 AL136116.2-201ENST00000404020 785 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 CRYBB2P1-203ENST00000415709 538 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SPTA1P02549 GLUD1P3-202ENST00000508551 200 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.43□□□□□ -1.7
SPTA1P02549 AC015795.1-201ENST00000513669 327 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 HNRNPRP2-201ENST00000528421 743 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AL121932.1-201ENST00000605542 214 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.43□□□□□ -1.7
SPTA1P02549 AL356608.1-201ENST00000610034 820 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 AC024023.1-201ENST00000624530 922 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.43□□□□□ -1.7
SPTA1P02549 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPTA1P02549 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 NEAT1-202ENST00000501122 22743 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 AC002525.1-201ENST00000624392 1622 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 AL162591.2-201ENST00000449634 317 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 AC245028.2-201ENST00000458673 253 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 OR2A3P-201ENST00000493774 953 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.42□□□□□ -1.7
SPTA1P02549 OR5M2P-201ENST00000529003 936 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 AC039056.2-201ENST00000622261 511 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.42□□□□□ -1.7
SPTA1P02549 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPTA1P02549 MUC2-202ENST00000613187 4845 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 U3.28-201ENST00000391249 210 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 RPS26P8-201ENST00000393490 348 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 RN7SKP202-201ENST00000410439 330 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 NUTF2P3-201ENST00000448540 384 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.42□□□□□ -1.7
SPTA1P02549 RPL36AP41-201ENST00000493820 306 ntBASIC4.42□□□□□ -1.7
SPTA1P02549 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SPTA1P02549 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SPTA1P02549 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.41□□□□□ -1.7
SPTA1P02549 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.41□□□□□ -1.7
SPTA1P02549 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 RNA5SP397-201ENST00000391323 118 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 AL133547.1-201ENST00000448546 220 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 SLC25A51P1-201ENST00000468432 871 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.41□□□□□ -1.7
SPTA1P02549 MIR6839-201ENST00000620425 113 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
SPTA1P02549 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
SPTA1P02549 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 AC233968.1-201ENST00000611212 1300 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 HSPD1P8-201ENST00000400121 1658 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SPTA1P02549 RN7SKP177-201ENST00000410567 355 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.41□□□□□ -1.7
SPTA1P02549 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.41□□□□□ -1.7
SPTA1P02549 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.41□□□□□ -1.7
SPTA1P02549 OR4A17P-201ENST00000526032 904 ntBASIC4.41□□□□□ -1.7
SPTA1P02549 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.41□□□□□ -1.7
SPTA1P02549 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPTA1P02549 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.4□□□□□ -1.7
SPTA1P02549 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SPTA1P02549 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
SPTA1P02549 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SPTA1P02549 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SPTA1P02549 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms