Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC114322.1-201ENST00000506771 926 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SKP141-201ENST00000516167 338 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC034205.1-201ENST00000520621 638 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC087888.1-201ENST00000550884 1254 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC008521.2-201ENST00000591021 259 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AP005432.2-201ENST00000608162 586 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RMST_10.1-201ENST00000616309 154 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC241377.1-201ENST00000619797 406 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AL078595.3-201ENST00000623815 1166 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 AC107021.2-201ENST00000567714 2095 ntBASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TCRBV7S3A2A0A539 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.56
TCRBV7S3A2A0A539 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RNU4-7P-201ENST00000364758 141 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RNU1-149P-201ENST00000390870 161 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 ANAPC10P1-201ENST00000395991 556 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AL390316.1-201ENST00000406279 553 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RN7SKP286-201ENST00000410894 299 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 DEFB130D-201ENST00000426866 237 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RPS29P14-201ENST00000431518 171 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 MTCYBP15-201ENST00000433123 1127 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 CYCSP6-201ENST00000434498 302 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 FABP5P3-201ENST00000437960 408 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RPL31P15-201ENST00000449770 338 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RPL7P6-201ENST00000480903 738 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC005412.2-201ENST00000492004 341 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC098862.1-201ENST00000504991 413 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC097173.1-201ENST00000505862 819 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AP000619.2-201ENST00000546014 969 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC022404.1-201ENST00000555320 273 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AL049870.4-201ENST00000555741 486 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AL022067.1-201ENST00000602426 454 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC099785.1-201ENST00000605697 437 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC007204.2-201ENST00000615022 616 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AL691477.1-201ENST00000624398 162 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 AC083865.1-201ENST00000636634 831 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 CASC19-281ENST00000642118 1554 ntBASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.27□□□□□ -1.57
TCRBV7S3A2A0A539 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TCRBV7S3A2A0A539 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms