Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AP005432.2-201ENST00000608162 586 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC093799.2-201ENST00000610062 578 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC084824.5-201ENST00000612009 413 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC090510.2-201ENST00000617465 629 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC068870.2-201ENST00000620635 389 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 NXF4-202ENST00000416098 1465 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 TTC39DP-201ENST00000416781 1688 ntBASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SNX9Q9Y5X1 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AL606537.1-201ENST00000607258 2011 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 RLIMP2-201ENST00000427891 1563 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 RN7SKP113-201ENST00000363891 295 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 SNORA58B-201ENST00000364259 136 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AL390316.1-201ENST00000406279 553 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 KNOP1P3-201ENST00000446933 426 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 RN7SL443P-201ENST00000464331 290 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 RPL5P22-201ENST00000480199 884 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC008410.1-201ENST00000483777 339 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 NPM1P52-201ENST00000518264 846 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC126365.2-201ENST00000580630 379 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 BNIP3P19-201ENST00000605397 577 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC006840.1-201ENST00000623069 542 ntBASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX9Q9Y5X1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC005005.4-201ENST00000623789 16698 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AL353625.1-202ENST00000366273 571 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 CCNB2P1-201ENST00000399411 1150 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 GJA6P-201ENST00000415117 1042 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 RAB9AP4-201ENST00000415230 609 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 MTND4LP14-201ENST00000429447 288 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC009238.2-201ENST00000431026 355 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC110775.1-201ENST00000513721 462 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 HMGN1P15-201ENST00000513870 295 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 SETP1-201ENST00000556014 845 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC022884.2-201ENST00000578535 580 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AL671309.1-201ENST00000603750 544 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC110792.4-201ENST00000609843 298 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC022306.3-201ENST00000619930 550 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 CASC19-222ENST00000641321 1173 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 MUC2-202ENST00000613187 4845 ntBASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SNX9Q9Y5X1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms