Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 AL357562.1-201ENST00000624911 609 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 BX284613.1-201ENST00000452221 1641 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 AC027514.1-201ENST00000588561 1603 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 AL390237.1-201ENST00000404226 1415 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 ECM1P2-201ENST00000503354 1577 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 UGT2B24P-201ENST00000514441 1597 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 AC139426.3-201ENST00000605648 2059 ntBASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PACSIN3Q9UKS6 AL137141.1-201ENST00000624622 4836 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 Y_RNA.77-201ENST00000362962 107 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RN7SKP69-201ENST00000365390 305 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RNU6-517P-201ENST00000384362 110 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL136310.1-201ENST00000404926 654 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 FCF1P5-201ENST00000406490 482 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL158825.1-201ENST00000414735 521 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RPL35AP31-201ENST00000418340 337 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RPS7P3-201ENST00000443360 580 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 PPIAP27-201ENST00000453800 265 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC008280.2-201ENST00000455473 307 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RPL6P9-201ENST00000466502 859 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL157777.1-201ENST00000468100 304 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 TPT1P3-201ENST00000492841 512 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC008629.2-201ENST00000503783 483 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC008549.1-201ENST00000512900 643 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 PCNPP1-201ENST00000552501 511 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC104229.1-201ENST00000561364 255 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC093524.1-201ENST00000564266 1094 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL354943.1-201ENST00000572103 781 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AP003465.2-201ENST00000602571 373 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL645933.2-201ENST00000606743 1207 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL365181.4-201ENST00000609800 547 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AC073968.1-201ENST00000618594 637 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 AL445670.1-201ENST00000618889 801 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 OR11H2-202ENST00000641517 1085 ntBASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PACSIN3Q9UKS6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC008432.1-201ENST00000615912 1320 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC130360.2-201ENST00000533477 1556 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 Y_RNA.559-201ENST00000384686 107 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 MTND4LP20-201ENST00000402379 270 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AC096921.1-201ENST00000411661 375 ntBASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.52□□□□□ -1.53
PACSIN3Q9UKS6 RPL12P43-201ENST00000420608 499 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms