Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC245047.2-201ENST00000441060 530 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 Z99127.2-201ENST00000441426 334 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 FAR2P1-206ENST00000449736 709 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 RN7SL172P-201ENST00000460535 303 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 RN7SL30P-201ENST00000488416 306 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 MIR4489-201ENST00000578869 62 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 SUMO2P15-201ENST00000604285 278 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 BX005214.3-202ENST00000619809 325 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AP002505.2-201ENST00000623585 696 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AP000648.2-201ENST00000624182 404 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AC235565.1-201ENST00000456962 1325 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 SMG1P4-204ENST00000523028 4131 ntBASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CHRNA9Q9UGM1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC017079.1-201ENST00000333650 415 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 MIR223-201ENST00000385204 110 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 GSTA12P-201ENST00000402398 508 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 DUTP5-201ENST00000406790 469 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 U3.32-201ENST00000408116 212 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 RN7SKP126-201ENST00000411143 300 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC211486.3-201ENST00000412694 621 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AL590806.1-201ENST00000415818 853 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 NANOGP4-201ENST00000427230 913 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 RPL7AP61-201ENST00000443410 636 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC022784.5-201ENST00000522241 437 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 OR4A46P-201ENST00000527255 933 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC116447.1-201ENST00000613153 453 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 MIR6826-201ENST00000617808 98 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 MIR6886-201ENST00000619864 61 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 THAP12P5-201ENST00000405864 2275 ntBASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.67□□□□□ -1.66
CHRNA9Q9UGM1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms