Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC005165.2-201ENST00000466070 380 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RN7SL688P-201ENST00000471754 275 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 ACTR3P3-201ENST00000480448 893 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 IGKV2D-10-201ENST00000520194 281 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 OR5F2P-201ENST00000532761 941 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 PHBP2-201ENST00000532859 806 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC011840.5-201ENST00000582125 771 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 KPNA2P3-201ENST00000584190 848 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC009977.1-201ENST00000586015 570 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC009027.1-201ENST00000604510 479 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RPL12P48-201ENST00000605620 304 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC018695.5-201ENST00000605872 315 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC005332.6-201ENST00000613178 446 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AL138693.1-201ENST00000622219 129 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 CLUHP10-201ENST00000631979 980 ntBASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CUEDC1Q9NWM3 AC068733.2-201ENST00000605434 1418 ntBASIC7.09□□□□□ -1.28
CUEDC1Q9NWM3 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CUEDC1Q9NWM3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.28
CUEDC1Q9NWM3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.28
CUEDC1Q9NWM3 AC132219.2-201ENST00000624416 2327 ntBASIC7.09□□□□□ -1.28
CUEDC1Q9NWM3 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AL161901.1-201ENST00000624954 3425 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ENSAP3-201ENST00000312710 333 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RNU5D-1-201ENST00000363299 116 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AL356057.3-201ENST00000402607 340 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 SOD1P1-201ENST00000407803 440 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 Y_RNA.618-201ENST00000410949 107 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RNU6-847P-201ENST00000411115 108 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 HMGB1P11-201ENST00000413899 637 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 NPM1P18-201ENST00000434232 732 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC009961.2-201ENST00000435771 251 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 GTF2IP13-201ENST00000438487 386 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 HMGB3P12-201ENST00000438745 556 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RPL7P12-201ENST00000446719 750 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 MTND1P9-201ENST00000453775 944 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC234771.3-201ENST00000454984 622 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AL133480.2-201ENST00000456723 487 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC117395.2-201ENST00000463122 1128 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RPL36AP51-201ENST00000487216 318 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RPL7P38-201ENST00000488396 739 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC104136.1-201ENST00000512969 394 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC034159.1-201ENST00000513885 583 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RNU7-30P-201ENST00000516835 62 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms