Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 AL133268.1-201ENST00000405676 1401 ntBASIC4.8□□□□□ -1.64
TREX1Q9NSU2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.8□□□□□ -1.64
TREX1Q9NSU2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AL445487.1-201ENST00000415694 1580 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RLIMP2-201ENST00000427891 1563 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 Z95331.1-201ENST00000623075 23112 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-1320P-201ENST00000390838 107 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-1269P-201ENST00000391139 107 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 OR51B3P-201ENST00000412287 913 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RPL12P43-201ENST00000420608 499 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC106901.1-201ENST00000425086 698 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RBMY2QP-201ENST00000429799 1147 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC112498.1-201ENST00000444401 332 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AURKAPS2-201ENST00000454983 333 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-599P-201ENST00000459383 107 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-1193P-201ENST00000459461 107 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC114982.2-201ENST00000461396 358 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC107015.1-201ENST00000466902 747 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 BTF3P13-201ENST00000513224 490 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-513P-201ENST00000516104 104 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 IGLV2-28-201ENST00000520681 304 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AL445222.1-201ENST00000607259 628 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-368P-201ENST00000620928 107 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 RNU6-538P-201ENST00000622329 107 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
TREX1Q9NSU2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TREX1Q9NSU2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AL031595.2-201ENST00000624215 19071 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 OR2AM1P-201ENST00000422137 422 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AL450263.2-201ENST00000439400 589 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 RPSAP41-201ENST00000439695 860 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC104651.2-201ENST00000447549 528 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC234781.3-201ENST00000452540 973 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC108751.2-201ENST00000469993 231 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 RN7SL177P-201ENST00000476596 299 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 RN7SL808P-201ENST00000496066 299 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 OR7E18P-201ENST00000592589 702 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AP003499.2-201ENST00000624100 483 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TREX1Q9NSU2 AC104260.2-201ENST00000623551 3497 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
TREX1Q9NSU2 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 NCLP2-201ENST00000416078 1462 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AL590762.2-201ENST00000395798 571 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 OR51A6P-201ENST00000418680 1004 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 RPS27P18-201ENST00000431701 247 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 PSMD10P3-201ENST00000437000 448 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 PRPF38AP2-201ENST00000438179 851 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 RPL7AP6-201ENST00000477943 801 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms