Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 RPS17P8-201ENST00000434525 335 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 ELOCP3-201ENST00000439303 348 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 OR1H1P-201ENST00000448731 937 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 TPT1P13-201ENST00000449760 499 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AL672167.3-201ENST00000465951 960 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AC135352.1-201ENST00000506173 1418 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 RPL23AP53-201ENST00000521854 457 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AP006289.1-201ENST00000538089 277 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AL161616.1-201ENST00000611867 286 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 AC008758.3-201ENST00000507003 1829 ntBASIC4.28□□□□□ -1.72
KIAA1549Q9HCM3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
KIAA1549Q9HCM3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AL358178.1-201ENST00000407698 397 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 RNU2-50P-201ENST00000410494 143 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 RPS5P7-201ENST00000456664 608 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 MIR5096-201ENST00000583713 70 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AL137100.1-201ENST00000556703 1620 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AL592182.3-201ENST00000642132 3304 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 Z97832.1-201ENST00000402490 328 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC004690.1-201ENST00000418216 328 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC009480.2-201ENST00000422916 432 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 OR5M12P-201ENST00000423388 929 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 BTF3P6-201ENST00000448054 499 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 PGBD4P4-201ENST00000509673 613 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AL023583.1-201ENST00000607518 1143 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 FAM27B-201ENST00000610601 213 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC083809.1-201ENST00000615051 472 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AL731566.2-201ENST00000618971 317 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 MIR6853-201ENST00000619642 74 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC138965.3-201ENST00000623875 498 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 AC097063.1-201ENST00000426714 1797 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 BCORP1-203ENST00000513194 5093 ntBASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.27□□□□□ -1.73
KIAA1549Q9HCM3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC008549.2-201ENST00000333482 706 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 RPL21P108-201ENST00000413857 481 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 TXNP2-201ENST00000443918 295 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 RHEBP2-201ENST00000450289 600 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 CEACAMP6-201ENST00000452007 574 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AL591473.1-201ENST00000464297 313 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 AC006967.1-201ENST00000467608 589 ntBASIC4.26□□□□□ -1.73
KIAA1549Q9HCM3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms