Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 SEC63P1-201ENST00000425785 1258 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC124944.2-201ENST00000429866 1242 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 GAPDHP14-201ENST00000450472 937 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL035090.1-201ENST00000454835 332 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 RNU6-1218P-201ENST00000458990 108 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC022133.1-201ENST00000490961 571 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC015720.2-201ENST00000567709 334 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC005341.1-201ENST00000571086 708 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 MIR4505-201ENST00000582238 73 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC006363.1-201ENST00000603806 463 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL122125.1-201ENST00000616999 600 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC022960.3-201ENST00000619794 441 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 MTND4P31-201ENST00000425607 1343 ntBASIC5.18□□□□□ -1.58
BRF2Q9HAW0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF2Q9HAW0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 VN2R3P-201ENST00000422626 1412 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 MIR621-201ENST00000384919 96 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 RSL24D1P1-201ENST00000404972 493 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AL355615.1-201ENST00000406187 641 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 GSTM3P2-201ENST00000412746 530 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 HMGB3P31-201ENST00000413333 595 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 SRSF1P1-201ENST00000424058 520 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 MTND6P12-201ENST00000428247 522 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC092013.1-201ENST00000438795 332 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC064862.4-201ENST00000442180 334 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC105399.1-202ENST00000447303 205 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 NPM1P19-201ENST00000450070 712 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 RN7SL809P-201ENST00000482040 297 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC093801.2-201ENST00000503966 1050 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC074087.1-201ENST00000512059 724 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 RN7SKP99-201ENST00000517028 307 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 OR5AK3P-201ENST00000527486 1297 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC012254.4-201ENST00000588843 273 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AL391001.1-201ENST00000602747 715 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 AC055764.2-201ENST00000610089 670 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 VN1R9P-201ENST00000614184 867 ntBASIC5.17□□□□□ -1.58
BRF2Q9HAW0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BRF2Q9HAW0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms