Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC092747.2-201ENST00000545069 983 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 AC127381.1-201ENST00000555979 939 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC3.83□□□□□ -1.8
LITAFQ99732 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.83□□□□□ -1.8
LITAFQ99732 MIR4262-201ENST00000578394 54 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 MTCYBP13-201ENST00000578634 1093 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC090616.2-202ENST00000584248 222 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AC026898.1-201ENST00000586404 571 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC009237.13-201ENST00000603193 276 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AL163642.2-201ENST00000604722 1019 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC072039.2-201ENST00000608883 439 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AC090246.1-201ENST00000616499 426 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LITAFQ99732 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LITAFQ99732 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 EIF3EP1-201ENST00000433978 1316 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AC100871.1-201ENST00000507871 1456 ntBASIC3.83□□□□□ -1.8
LITAFQ99732 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC3.83□□□□□ -1.8
LITAFQ99732 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LITAFQ99732 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LITAFQ99732 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
LITAFQ99732 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LITAFQ99732 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 AL078621.3-201ENST00000623707 2042 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC3.82□□□□□ -1.8
LITAFQ99732 AL137100.1-201ENST00000556703 1620 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.82□□□□□ -1.8
LITAFQ99732 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.82□□□□□ -1.8
LITAFQ99732 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LITAFQ99732 MTND4P5-201ENST00000435821 1374 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC3.82□□□□□ -1.8
LITAFQ99732 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 Y_RNA.51-201ENST00000362725 102 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 RNU6-1339P-201ENST00000363574 91 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 MIR320B1-201ENST00000390209 79 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AL157702.1-201ENST00000398764 426 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AL021407.1-201ENST00000404531 386 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AL138880.1-201ENST00000405824 642 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 RNU6-757P-201ENST00000410334 100 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 RNU6-575P-201ENST00000411326 105 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 NPM1P40-201ENST00000412758 733 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 RPS4XP5-201ENST00000419038 768 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 TIMM9P2-201ENST00000419324 266 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AC098592.1-201ENST00000419352 333 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AC234781.4-201ENST00000419384 244 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 HSPD1P12-201ENST00000429127 1069 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 MTCO1P3-201ENST00000429327 192 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LITAFQ99732 KCTD10P1-201ENST00000434203 625 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 RPS21P1-201ENST00000434479 247 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.82□□□□□ -1.8
LITAFQ99732 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC3.82□□□□□ -1.8
LITAFQ99732 AC073465.2-201ENST00000440938 498 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AC009263.1-201ENST00000441193 1239 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 RPL23AP76-201ENST00000441860 458 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
LITAFQ99732 RPL31P44-201ENST00000447680 377 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3.82□□□□□ -1.8
LITAFQ99732 RHEBP2-201ENST00000450289 600 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC3.82□□□□□ -1.8
LITAFQ99732 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 DNAJC19P8-201ENST00000452887 259 ntBASIC3.82□□□□□ -1.8
LITAFQ99732 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.82□□□□□ -1.8
LITAFQ99732 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms