Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NEDD1Q8NHV4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NEDD1Q8NHV4 CAP1P2-201ENST00000417455 1409 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC105235.1-201ENST00000623208 1816 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RNA5SP350-201ENST00000363298 111 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 Y_RNA.372-201ENST00000365599 102 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 MIR606-201ENST00000384851 96 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 GCNT1P4-201ENST00000404096 329 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC068533.2-201ENST00000411872 306 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RPS7P8-201ENST00000418311 581 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 GPM6BP2-201ENST00000432046 144 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 TRIM60P16-201ENST00000444048 694 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RPL7P36-201ENST00000444633 681 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 GPM6BP1-201ENST00000446387 144 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 HMGB1P7-201ENST00000450921 612 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL133351.3-201ENST00000454998 193 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RPL12P30-201ENST00000488389 499 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC105252.1-201ENST00000503089 286 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 CCDC34P1-201ENST00000507441 517 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC111000.3-201ENST00000508057 576 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LRRC34P2-201ENST00000514850 553 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 SEC11B-201ENST00000518383 499 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC013701.1-201ENST00000522657 465 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC015917.1-201ENST00000579654 510 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC073091.2-201ENST00000603205 907 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL499605.1-201ENST00000604628 403 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL592148.2-201ENST00000612210 372 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL020991.1-201ENST00000612314 373 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AC073488.6-201ENST00000632293 754 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AP003486.1-201ENST00000525716 3994 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 AL359195.2-201ENST00000623657 4412 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.44□□□□□ -1.22
NEDD1Q8NHV4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 NBPF8-201ENST00000583271 5330 ntBASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NEDD1Q8NHV4 Y_RNA.419-201ENST00000384041 102 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms