Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF135Q8IUD6 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC093311.1-201ENST00000506586 2021 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 LINC00561-201ENST00000565815 2738 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC018688.1-201ENST00000636528 1754 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 RNA5SP308-201ENST00000362532 115 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 RN7SKP130-201ENST00000364924 301 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 SDCBPP3-201ENST00000419629 891 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC000089.1-201ENST00000424559 801 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 HMGN1P2-201ENST00000445197 310 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 PPIAP20-201ENST00000449839 135 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AL590365.1-201ENST00000450788 243 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 OR7E99P-201ENST00000505750 922 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC011411.1-201ENST00000509592 876 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 RN7SKP11-201ENST00000517018 287 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 OR5D2P-201ENST00000524390 911 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 CBX3P5-201ENST00000552017 521 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC026826.3-201ENST00000561747 158 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 RN7SL667P-201ENST00000582817 298 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC124312.5-201ENST00000604451 268 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AL442067.2-201ENST00000614033 363 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC009233.1-201ENST00000616477 371 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC018926.3-201ENST00000618841 406 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC089999.3-201ENST00000622440 577 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC005858.3-201ENST00000624756 589 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 MIR3662-201ENST00000637030 95 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC007996.1-201ENST00000620414 2821 ntBASIC7.42□□□□□ -1.22
RNF135Q8IUD6 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF135Q8IUD6 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 FARSBP1-201ENST00000435808 1778 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 IGKV7-3-201ENST00000357453 298 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 PPIAP22-201ENST00000358455 498 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 Y_RNA.279-201ENST00000364763 95 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 Y_RNA.548-201ENST00000384656 105 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 LARP1P1-201ENST00000407692 292 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 RN7SKP108-201ENST00000411367 328 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF135Q8IUD6 AL136133.1-201ENST00000413694 376 ntBASIC7.41□□□□□ -1.22
RNF135Q8IUD6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms