Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MTND2P2-201ENST00000434633 945 ntBASIC4.35□□□□□ -1.71
VBP1P61758 RPS29P9-201ENST00000440360 171 ntBASIC4.35□□□□□ -1.71
VBP1P61758 AP000281.1-201ENST00000444036 316 ntBASIC4.35□□□□□ -1.71
VBP1P61758 ATP5G1P3-201ENST00000463301 410 ntBASIC4.35□□□□□ -1.71
VBP1P61758 LSM3P4-201ENST00000502948 309 ntBASIC4.35□□□□□ -1.71
VBP1P61758 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.35□□□□□ -1.71
VBP1P61758 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.35□□□□□ -1.71
VBP1P61758 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.35□□□□□ -1.71
VBP1P61758 RNA5SP96-201ENST00000516041 107 ntBASIC4.35□□□□□ -1.71
VBP1P61758 RNU2-30P-201ENST00000516209 141 ntBASIC4.35□□□□□ -1.71
VBP1P61758 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VBP1P61758 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
VBP1P61758 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VBP1P61758 HMGN1P26-201ENST00000558737 303 ntBASIC4.35□□□□□ -1.71
VBP1P61758 AC084757.1-201ENST00000559987 490 ntBASIC4.35□□□□□ -1.71
VBP1P61758 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VBP1P61758 AC005520.3-201ENST00000602874 370 ntBASIC4.35□□□□□ -1.71
VBP1P61758 AC025946.2-201ENST00000603398 234 ntBASIC4.35□□□□□ -1.71
VBP1P61758 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.35□□□□□ -1.71
VBP1P61758 AC111152.1-202ENST00000635848 339 ntBASIC4.35□□□□□ -1.71
VBP1P61758 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.35□□□□□ -1.71
VBP1P61758 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VBP1P61758 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VBP1P61758 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VBP1P61758 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VBP1P61758 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VBP1P61758 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.35□□□□□ -1.71
VBP1P61758 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.34□□□□□ -1.71
VBP1P61758 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 AL353625.1-202ENST00000366273 571 ntBASIC4.34□□□□□ -1.71
VBP1P61758 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.34□□□□□ -1.71
VBP1P61758 RNU6-146P-201ENST00000384602 108 ntBASIC4.34□□□□□ -1.71
VBP1P61758 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VBP1P61758 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 VDAC1P9-201ENST00000412766 841 ntBASIC4.34□□□□□ -1.71
VBP1P61758 SDHDP6-201ENST00000414693 480 ntBASIC4.34□□□□□ -1.71
VBP1P61758 MTND4LP21-201ENST00000415303 295 ntBASIC4.34□□□□□ -1.71
VBP1P61758 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 RPS4XP16-201ENST00000427198 791 ntBASIC4.34□□□□□ -1.71
VBP1P61758 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 PRPF38AP2-201ENST00000438179 851 ntBASIC4.34□□□□□ -1.71
VBP1P61758 RPL12P49-201ENST00000441100 121 ntBASIC4.34□□□□□ -1.71
VBP1P61758 RPS11P7-201ENST00000442125 465 ntBASIC4.34□□□□□ -1.71
VBP1P61758 EEF1B2P6-201ENST00000445713 673 ntBASIC4.34□□□□□ -1.71
VBP1P61758 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.34□□□□□ -1.71
VBP1P61758 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 RNU6-941P-201ENST00000516346 108 ntBASIC4.34□□□□□ -1.71
VBP1P61758 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.34□□□□□ -1.71
VBP1P61758 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 AC007424.1-203ENST00000554613 687 ntBASIC4.34□□□□□ -1.71
VBP1P61758 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.34□□□□□ -1.71
VBP1P61758 RPL10P14-201ENST00000565265 298 ntBASIC4.34□□□□□ -1.71
VBP1P61758 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 AC023509.5-201ENST00000617434 807 ntBASIC4.34□□□□□ -1.71
VBP1P61758 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
VBP1P61758 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
VBP1P61758 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 Z98755.1-201ENST00000407015 1384 ntBASIC4.34□□□□□ -1.71
VBP1P61758 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.34□□□□□ -1.71
VBP1P61758 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VBP1P61758 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VBP1P61758 AC008725.1-201ENST00000605123 2263 ntBASIC4.34□□□□□ -1.72
VBP1P61758 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VBP1P61758 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.34□□□□□ -1.72
VBP1P61758 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VBP1P61758 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
VBP1P61758 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
VBP1P61758 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 KARSP3-201ENST00000571212 1504 ntBASIC4.33□□□□□ -1.72
VBP1P61758 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.33□□□□□ -1.72
VBP1P61758 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 AC103591.2-201ENST00000265259 766 ntBASIC4.33□□□□□ -1.72
VBP1P61758 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VBP1P61758 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
VBP1P61758 RNA5SP513-201ENST00000364648 118 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms