Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 CASC19-284ENST00000642142 1868 ntBASIC5.04□□□□□ -1.6
CDH13P55290 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH13P55290 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH13P55290 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH13P55290 U3.3-201ENST00000362986 216 ntBASIC5.03□□□□□ -1.6
CDH13P55290 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH13P55290 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDH13P55290 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 AL160175.1-201ENST00000428124 247 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AC022022.1-201ENST00000430304 178 ntBASIC5.03□□□□□ -1.6
CDH13P55290 FAM96AP1-201ENST00000430879 482 ntBASIC5.03□□□□□ -1.6
CDH13P55290 BX119904.1-201ENST00000432026 348 ntBASIC5.03□□□□□ -1.6
CDH13P55290 GAPDHP34-201ENST00000432112 823 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH13P55290 RPS26P41-201ENST00000450370 284 ntBASIC5.03□□□□□ -1.6
CDH13P55290 HMGB1P5-202ENST00000451497 985 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH13P55290 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH13P55290 AC012400.1-201ENST00000518452 381 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH13P55290 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH13P55290 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH13P55290 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH13P55290 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 MIR3614-201ENST00000581261 86 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH13P55290 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 SUMO2P14-201ENST00000604488 293 ntBASIC5.03□□□□□ -1.6
CDH13P55290 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 AC126175.1-201ENST00000617041 758 ntBASIC5.03□□□□□ -1.6
CDH13P55290 MIR6861-201ENST00000618657 64 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AL109620.1-201ENST00000618738 1197 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AC005840.5-201ENST00000619166 599 ntBASIC5.03□□□□□ -1.6
CDH13P55290 AC006840.1-201ENST00000623069 542 ntBASIC5.03□□□□□ -1.6
CDH13P55290 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 AC073869.10-201ENST00000642016 354 ntBASIC5.03□□□□□ -1.6
CDH13P55290 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH13P55290 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH13P55290 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.03□□□□□ -1.6
CDH13P55290 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH13P55290 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH13P55290 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH13P55290 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH13P55290 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CDH13P55290 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH13P55290 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH13P55290 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH13P55290 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH13P55290 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH13P55290 HMGB1P10-201ENST00000395823 563 ntBASIC5.02□□□□□ -1.61
CDH13P55290 ATP5HP3-201ENST00000396994 486 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH13P55290 PTGES3P2-201ENST00000407942 482 ntBASIC5.02□□□□□ -1.61
CDH13P55290 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH13P55290 RNA5SP498-201ENST00000411342 120 ntBASIC5.02□□□□□ -1.61
CDH13P55290 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH13P55290 AC104333.2-201ENST00000422630 192 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH13P55290 EI24P4-201ENST00000423683 1078 ntBASIC5.02□□□□□ -1.61
CDH13P55290 RPS29P14-201ENST00000431518 171 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH13P55290 AP000936.3-201ENST00000438127 255 ntBASIC5.02□□□□□ -1.61
CDH13P55290 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH13P55290 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AL133445.1-201ENST00000467051 452 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AC096741.1-201ENST00000472250 846 ntBASIC5.02□□□□□ -1.61
CDH13P55290 PPIAP19-201ENST00000486414 492 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AC005412.2-201ENST00000492004 341 ntBASIC5.02□□□□□ -1.61
CDH13P55290 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH13P55290 AC097173.1-201ENST00000505862 819 ntBASIC5.02□□□□□ -1.61
CDH13P55290 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH13P55290 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH13P55290 AP006245.2-201ENST00000522004 300 ntBASIC5.02□□□□□ -1.61
CDH13P55290 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH13P55290 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH13P55290 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms