Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL355333.1-201ENST00000605632 279 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 MIR98-201ENST00000606724 119 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.91□□□□□ -1.3
EPHA4P54764 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.91□□□□□ -1.3
EPHA4P54764 AL365204.3-201ENST00000612448 685 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AL080312.2-201ENST00000613001 630 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AC090527.3-201ENST00000619041 548 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AL161420.1-201ENST00000619393 264 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 YWHAEP7-203ENST00000622054 312 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AC015871.5-202ENST00000623252 701 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.91□□□□□ -1.3
EPHA4P54764 AC140479.4-205ENST00000636339 820 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AC003973.3-201ENST00000624863 2822 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 AC011008.2-201ENST00000624866 3352 ntBASIC6.91□□□□□ -1.3
EPHA4P54764 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.91□□□□□ -1.3
EPHA4P54764 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.91□□□□□ -1.3
EPHA4P54764 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHA4P54764 HCG18-244ENST00000602516 2890 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHA4P54764 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
EPHA4P54764 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
EPHA4P54764 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHA4P54764 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHA4P54764 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHA4P54764 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHA4P54764 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHA4P54764 AL121972.1-201ENST00000402023 252 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AL356432.1-201ENST00000405809 419 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHA4P54764 RIMKLBP2-201ENST00000424737 654 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 GTF2IP20-201ENST00000431663 360 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 HMGB3P10-201ENST00000434734 572 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AC009518.3-201ENST00000438972 253 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AL672138.1-201ENST00000450604 1015 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 TRGVB-201ENST00000453257 471 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 SNORA81.1-201ENST00000458922 177 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AC021660.1-201ENST00000465006 554 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHA4P54764 AC027801.3-201ENST00000515049 698 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 SNORA81.2-201ENST00000516868 170 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 SCARNA11.1-201ENST00000516918 132 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 SCARNA6.1-201ENST00000516989 238 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 RN7SKP233-201ENST00000517005 110 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.9□□□□□ -1.3
EPHA4P54764 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHA4P54764 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.9□□□□□ -1.3
EPHA4P54764 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.9□□□□□ -1.3
EPHA4P54764 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHA4P54764 RNU6-84P-201ENST00000607737 102 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AC006328.2-201ENST00000623198 397 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AC012005.2-201ENST00000624333 397 ntBASIC6.9□□□□□ -1.3
EPHA4P54764 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.9□□□□□ -1.31
EPHA4P54764 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.9□□□□□ -1.31
EPHA4P54764 AC093225.1-201ENST00000506867 1408 ntBASIC6.9□□□□□ -1.31
EPHA4P54764 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.9□□□□□ -1.31
EPHA4P54764 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 KARSP2-201ENST00000415696 1639 ntBASIC6.9□□□□□ -1.31
EPHA4P54764 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.9□□□□□ -1.31
EPHA4P54764 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 AC025574.1-201ENST00000554784 1653 ntBASIC6.9□□□□□ -1.31
EPHA4P54764 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
EPHA4P54764 AC005261.2-201ENST00000593427 4258 ntBASIC6.9□□□□□ -1.31
EPHA4P54764 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.9□□□□□ -1.31
EPHA4P54764 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHA4P54764 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
EPHA4P54764 AC107021.2-201ENST00000567714 2095 ntBASIC6.89□□□□□ -1.31
EPHA4P54764 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHA4P54764 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHA4P54764 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHA4P54764 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
EPHA4P54764 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHA4P54764 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHA4P54764 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHA4P54764 FRG1BP-201ENST00000278882 761 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms