Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC073091.2-201ENST00000603205 907 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 AC022106.2-201ENST00000620114 757 ntBASIC5.61□□□□□ -1.51
NEDD4P46934 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD4P46934 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.6□□□□□ -1.51
NEDD4P46934 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NEDD4P46934 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NEDD4P46934 AL590762.2-201ENST00000395798 571 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 USP9YP9-201ENST00000429406 715 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.6□□□□□ -1.51
NEDD4P46934 AC006466.1-201ENST00000438721 289 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.6□□□□□ -1.51
NEDD4P46934 AC108463.1-201ENST00000450258 347 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 AL445433.1-201ENST00000457507 257 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 RPL12P20-201ENST00000475538 479 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 AC011005.3-201ENST00000491624 395 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 AC020890.1-201ENST00000491837 504 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 RNA5SP249-201ENST00000516127 99 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 OR8A2P-201ENST00000528631 952 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.6□□□□□ -1.51
NEDD4P46934 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.6□□□□□ -1.51
NEDD4P46934 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 IMMP1LP1-201ENST00000605170 488 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 AP001642.1-201ENST00000624727 2117 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 MFSD8-216ENST00000641147 4009 ntBASIC5.6□□□□□ -1.51
NEDD4P46934 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NEDD4P46934 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD4P46934 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD4P46934 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
NEDD4P46934 AL022311.1-201ENST00000623726 19416 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.59□□□□□ -1.51
NEDD4P46934 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD4P46934 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD4P46934 AC019050.1-201ENST00000418508 492 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.59□□□□□ -1.51
NEDD4P46934 RFESDP1-201ENST00000422350 461 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.59□□□□□ -1.51
NEDD4P46934 RNU6-775P-201ENST00000459318 96 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.59□□□□□ -1.51
NEDD4P46934 AC138938.1-201ENST00000515431 782 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 RNU1-6P-201ENST00000516290 144 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.59□□□□□ -1.51
NEDD4P46934 TRAV11-201ENST00000539512 339 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.59□□□□□ -1.51
NEDD4P46934 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.59□□□□□ -1.51
NEDD4P46934 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.59□□□□□ -1.51
NEDD4P46934 MIR4270-201ENST00000581799 70 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.59□□□□□ -1.51
NEDD4P46934 AC132825.8-201ENST00000640783 297 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 AL603750.1-201ENST00000624216 1717 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD4P46934 AL731566.1-201ENST00000620490 1937 ntBASIC5.59□□□□□ -1.51
NEDD4P46934 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD4P46934 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD4P46934 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
NEDD4P46934 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.59□□□□□ -1.51
NEDD4P46934 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.59□□□□□ -1.51
NEDD4P46934 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD4P46934 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD4P46934 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD4P46934 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD4P46934 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD4P46934 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
NEDD4P46934 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD4P46934 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.58□□□□□ -1.52
NEDD4P46934 AC233968.1-201ENST00000611212 1300 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD4P46934 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD4P46934 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NEDD4P46934 CYB5AP4-201ENST00000396692 399 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 RPS20P25-201ENST00000412447 352 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.58□□□□□ -1.52
NEDD4P46934 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.58□□□□□ -1.52
NEDD4P46934 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.58□□□□□ -1.52
NEDD4P46934 OR7L1P-201ENST00000456181 380 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.58□□□□□ -1.52
NEDD4P46934 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.58□□□□□ -1.52
NEDD4P46934 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NEDD4P46934 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.58□□□□□ -1.52
NEDD4P46934 AC010487.1-201ENST00000594408 1172 ntBASIC5.58□□□□□ -1.52
NEDD4P46934 AC008536.1-201ENST00000602872 669 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms