Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.08□□□□□ -1.44
COL18A1P39060 SUMO2P19-201ENST00000518920 295 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.08□□□□□ -1.44
COL18A1P39060 AC015912.2-201ENST00000571053 181 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.08□□□□□ -1.44
COL18A1P39060 AC020634.1-201ENST00000608701 549 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 AP005019.3-201ENST00000620418 560 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.08□□□□□ -1.44
COL18A1P39060 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.08□□□□□ -1.44
COL18A1P39060 EIF2AP4-201ENST00000424793 1781 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL18A1P39060 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL18A1P39060 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
COL18A1P39060 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 AC005261.4-201ENST00000600047 1385 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL18A1P39060 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
COL18A1P39060 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
COL18A1P39060 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 NRBF2P2-201ENST00000413087 861 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 COX6CP15-201ENST00000426313 211 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.08□□□□□ -1.44
COL18A1P39060 Z95327.1-201ENST00000446082 482 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.08□□□□□ -1.44
COL18A1P39060 AC245389.1-201ENST00000605141 529 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 LINC00622-201ENST00000562811 1570 ntBASIC6.08□□□□□ -1.44
COL18A1P39060 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.08□□□□□ -1.44
COL18A1P39060 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL18A1P39060 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.07□□□□□ -1.44
COL18A1P39060 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
COL18A1P39060 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC6.07□□□□□ -1.44
COL18A1P39060 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.07□□□□□ -1.44
COL18A1P39060 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 AL021877.2-201ENST00000624442 10684 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 RPS27AP11-201ENST00000402798 447 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 RNA5SP44-201ENST00000410446 133 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 AL132765.1-201ENST00000434165 553 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 HSFY6P-201ENST00000445573 403 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 AC023424.1-201ENST00000496058 459 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 AC090515.3-201ENST00000560431 315 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL18A1P39060 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL18A1P39060 CASC19-255ENST00000641733 1385 ntBASIC6.07□□□□□ -1.44
COL18A1P39060 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.07□□□□□ -1.44
COL18A1P39060 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.07□□□□□ -1.44
COL18A1P39060 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL18A1P39060 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL18A1P39060 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL18A1P39060 RPS26P8-201ENST00000393490 348 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.06□□□□□ -1.44
COL18A1P39060 AC021660.1-201ENST00000465006 554 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.06□□□□□ -1.44
COL18A1P39060 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.06□□□□□ -1.44
COL18A1P39060 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
COL18A1P39060 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL18A1P39060 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL18A1P39060 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL18A1P39060 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.06□□□□□ -1.44
COL18A1P39060 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.06□□□□□ -1.44
COL18A1P39060 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.06□□□□□ -1.44
COL18A1P39060 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.06□□□□□ -1.44
COL18A1P39060 RAB9AP4-201ENST00000415230 609 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 CKS1BP6-201ENST00000424932 240 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AL451062.2-201ENST00000427515 271 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 RPL23AP52-201ENST00000439311 478 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AP002812.1-201ENST00000495378 474 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.06□□□□□ -1.44
COL18A1P39060 SNORA31.9-201ENST00000516429 84 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AP003730.1-201ENST00000524605 285 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL18A1P39060 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.06□□□□□ -1.44
COL18A1P39060 AC034105.4-201ENST00000568304 277 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 CYCSP40-201ENST00000575927 294 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.06□□□□□ -1.44
COL18A1P39060 AC022916.3-201ENST00000592961 742 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.06□□□□□ -1.44
COL18A1P39060 AC140479.6-201ENST00000633535 357 ntBASIC6.06□□□□□ -1.44
COL18A1P39060 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL18A1P39060 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms