Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 ARL2BPP3-201ENST00000421226 480 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC124944.2-201ENST00000429866 1242 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 PTP4A1P3-201ENST00000433661 420 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AL359265.1-201ENST00000440296 795 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 Z99127.2-201ENST00000441426 334 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC006326.1-201ENST00000445465 787 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 HIGD1AP8-201ENST00000453927 274 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 DNAJB5P1-201ENST00000454004 806 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 RPL35AP28-201ENST00000459730 331 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 HMGB1P38-201ENST00000490557 577 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 OR9N1P-202ENST00000494289 481 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 RPS24P16-201ENST00000497294 392 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AL132857.1-201ENST00000555180 708 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC000095.2-202ENST00000637415 154 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC132825.7-201ENST00000638744 335 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC110716.2-201ENST00000563865 3945 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AL449283.1-201ENST00000602631 3403 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC004656.1-201ENST00000568479 4951 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 MFSD8-220ENST00000641243 1422 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 RNU4-27P-201ENST00000410889 139 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC096533.1-201ENST00000411645 353 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL139128.1-201ENST00000413921 941 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL133482.1-201ENST00000415988 498 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 RPS26P13-201ENST00000419030 330 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 RPS26P4-201ENST00000431743 355 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC016687.1-201ENST00000482574 353 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC006427.1-201ENST00000514359 712 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 HMGB1P46-201ENST00000520062 610 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC093014.1-201ENST00000548926 724 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC008088.1-201ENST00000580993 280 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL606834.3-201ENST00000602615 496 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 RPP40P2-201ENST00000603596 712 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC108738.1-201ENST00000603703 237 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AC008814.1-201ENST00000603797 406 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL162431.4-201ENST00000604674 411 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL451086.1-201ENST00000605596 223 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DOAP06340 AP005229.2-201ENST00000609980 697 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 MIR1264-201ENST00000616374 69 ntBASIC6.18□□□□□ -1.42
HLA-DOAP06340 AL512427.1-201ENST00000618593 349 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms