Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.65□□□□□ -1.35
PDGFAP04085 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.65□□□□□ -1.35
PDGFAP04085 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
PDGFAP04085 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.65□□□□□ -1.35
PDGFAP04085 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.65□□□□□ -1.35
PDGFAP04085 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFAP04085 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 Y_RNA.1-201ENST00000352915 104 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 RNU6-1085P-201ENST00000363576 107 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 Y_RNA.263-201ENST00000364659 114 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 MIR621-201ENST00000384919 96 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 RNU6-316P-201ENST00000391027 107 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 PEX12P1-201ENST00000400284 1048 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 ARL4AP5-201ENST00000404372 599 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 AC093019.1-201ENST00000443135 252 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 MTCO1P27-201ENST00000448269 226 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.64□□□□□ -1.35
PDGFAP04085 AC098818.1-201ENST00000478593 252 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 Y_RNA.704-201ENST00000516851 102 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 TPM3P3-201ENST00000521343 354 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.64□□□□□ -1.35
PDGFAP04085 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 AL512360.1-201ENST00000555346 234 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC107958.1-201ENST00000556576 290 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 AL031846.1-201ENST00000560933 314 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC026458.1-201ENST00000564330 438 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC025678.1-201ENST00000567861 338 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 AC127024.5-201ENST00000580085 462 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFAP04085 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 AL359999.1-201ENST00000604513 294 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AL513218.1-201ENST00000606527 391 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 AL445264.1-201ENST00000621719 171 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 MIR193BHG-214ENST00000641765 509 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 AC102941.1-201ENST00000567616 1537 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFAP04085 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 TRIM51HP-202ENST00000530412 1823 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.64□□□□□ -1.35
PDGFAP04085 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 CCDC150P1-201ENST00000537123 2215 ntBASIC6.64□□□□□ -1.35
PDGFAP04085 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFAP04085 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFAP04085 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDGFAP04085 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFAP04085 RNU6-1103P-201ENST00000384150 107 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 RNU6-225P-201ENST00000384613 103 ntBASIC6.63□□□□□ -1.35
PDGFAP04085 MIR575-201ENST00000385013 94 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms