Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AP003168.1-201ENST00000530091 307 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.7□□□□□ -1.66
MT-ND1P03886 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC126177.5-201ENST00000549599 178 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.7□□□□□ -1.66
MT-ND1P03886 MIR3908-201ENST00000579798 126 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 MIR3614-201ENST00000581261 86 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.7□□□□□ -1.66
MT-ND1P03886 AC005520.3-201ENST00000602874 370 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC022387.2-201ENST00000604050 448 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 HMGB1P51-201ENST00000605166 638 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC096553.1-201ENST00000605169 829 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC073592.7-201ENST00000623659 507 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 AC135068.12-201ENST00000637370 931 ntBASIC4.7□□□□□ -1.66
MT-ND1P03886 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
MT-ND1P03886 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
MT-ND1P03886 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
MT-ND1P03886 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
MT-ND1P03886 SPATA2P1-201ENST00000431223 2055 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
MT-ND1P03886 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.69□□□□□ -1.66
MT-ND1P03886 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MT-ND1P03886 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 VDAC2P1-201ENST00000399358 958 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC009804.1-201ENST00000400949 179 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 TMBIM7P-201ENST00000418074 855 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 QRSL1P2-201ENST00000418582 964 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 CKS1BP6-201ENST00000424932 240 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 MAPRE1P3-201ENST00000435438 796 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AL138899.2-201ENST00000439139 499 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 TXNP2-201ENST00000443918 295 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC004980.3-201ENST00000447046 365 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC243772.1-201ENST00000451620 410 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC021205.1-201ENST00000468797 348 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC096741.1-201ENST00000472250 846 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 MTATP6P1-201ENST00000514057 681 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AL589674.2-201ENST00000604304 337 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 AC015982.1-201ENST00000608113 465 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC005840.5-201ENST00000619166 599 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.69□□□□□ -1.66
MT-ND1P03886 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC004808.2-201ENST00000627965 773 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.69□□□□□ -1.66
MT-ND1P03886 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC009643.2-201ENST00000603543 1448 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
MT-ND1P03886 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.69□□□□□ -1.66
MT-ND1P03886 AC107027.3-201ENST00000565095 3473 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MT-ND1P03886 CASC19-284ENST00000642142 1868 ntBASIC4.69□□□□□ -1.66
MT-ND1P03886 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
MT-ND1P03886 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MT-ND1P03886 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MT-ND1P03886 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MT-ND1P03886 SNORA67-201ENST00000384423 137 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 LRRC37BP1-201ENST00000398851 714 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AL592291.1-201ENST00000403830 352 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 AL034374.1-201ENST00000406329 351 ntBASIC4.68□□□□□ -1.66
MT-ND1P03886 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MT-ND1P03886 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.68□□□□□ -1.66
MT-ND1P03886 SLC35E1P1-201ENST00000419313 864 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms