Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MIR320B1-201ENST00000390209 79 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 OR4K12P-201ENST00000406538 961 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 SLC20A1P1-201ENST00000413906 956 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 TRGV6-201ENST00000417928 299 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 NMNAT1P2-201ENST00000435192 860 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RPL12P46-201ENST00000436610 195 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AL157827.1-201ENST00000447622 132 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AL445433.1-201ENST00000457507 257 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RPL9P15-201ENST00000491096 532 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC097173.1-201ENST00000505862 819 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC067904.2-201ENST00000517322 1283 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC011853.1-201ENST00000518911 454 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 HMGB1P40-201ENST00000525121 540 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC009704.2-201ENST00000618739 483 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AL591926.1-201ENST00000620542 217 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 MAPK10-349ENST00000641767 3661 ntBASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SND1-IT1Q9HBX3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AL359922.3-201ENST00000624779 1670 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 CASC19-206ENST00000641028 1430 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 DDX18P4-201ENST00000511690 1966 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 MIR133B-201ENST00000362210 119 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 RNA5SP46-201ENST00000362370 120 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC048351.1-201ENST00000420064 602 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AL606490.7-201ENST00000433136 191 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 RPS29P10-201ENST00000439197 166 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 MRPL48P1-201ENST00000445390 636 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 RN7SL51P-201ENST00000468230 285 ntBASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SND1-IT1Q9HBX3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms