Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 THAP12P4-201ENST00000528321 2266 ntBASIC5.06□□□□□ -1.6
LRRC40Q9H9A6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AP001642.1-201ENST00000624727 2117 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 ECM1P2-201ENST00000503354 1577 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AL136116.2-201ENST00000404020 785 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC073052.1-201ENST00000440417 714 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 PPIAP20-201ENST00000449839 135 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 RNA5SP249-201ENST00000516127 99 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC022832.1-201ENST00000530718 645 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AP000919.1-201ENST00000582850 985 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 EIF1P5-201ENST00000585002 234 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 SUMO2P15-201ENST00000604285 278 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC104687.2-201ENST00000604442 342 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 TAS2R6P-201ENST00000605022 826 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AC087783.2-201ENST00000605070 562 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AL049794.2-201ENST00000616301 365 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AP002967.1-201ENST00000624203 539 ntBASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRRC40Q9H9A6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RPL34P6-201ENST00000432390 345 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AURKAPS1-201ENST00000451805 1212 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RPL10P17-201ENST00000453852 316 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RN7SL517P-201ENST00000462240 305 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RPS18P6-201ENST00000476880 458 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RN7SL244P-201ENST00000493405 297 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RNU6-319P-201ENST00000516025 108 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RNA5SP303-201ENST00000516192 130 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 RNA5SP43-201ENST00000516559 110 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC005868.1-201ENST00000536421 331 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC092490.3-201ENST00000545370 572 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 OR11J2P-201ENST00000555298 907 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 AC005377.1-201ENST00000605126 456 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.04□□□□□ -1.6
LRRC40Q9H9A6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRC40Q9H9A6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms