Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC073869.10-201ENST00000642016 354 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AL731532.2-201ENST00000623542 1953 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 AC090017.1-201ENST00000548612 1779 ntBASIC5.04□□□□□ -1.6
PDLIM5Q96HC4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 U3.2-201ENST00000362981 210 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC048351.1-201ENST00000420064 602 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC099336.2-201ENST00000422457 254 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 MTND3P4-201ENST00000453537 303 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC099560.2-201ENST00000457554 255 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 RPS27AP16-201ENST00000492222 470 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC104109.1-201ENST00000498563 436 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 RNU6-1308P-201ENST00000516817 103 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 MIR3936-201ENST00000584304 110 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 IMMP1LP3-201ENST00000604197 224 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AL049767.1-202ENST00000637826 242 ntBASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
PDLIM5Q96HC4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 TCP1P3-201ENST00000414406 1498 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 SNORA17.1-201ENST00000362945 126 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 SNORA2.3-201ENST00000383920 135 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 U3.25-201ENST00000391209 220 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 CHMP1B2P-201ENST00000399581 597 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 RN7SKP59-201ENST00000410520 314 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 NPM1P4-201ENST00000414095 812 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 NPM1P22-201ENST00000427761 952 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AL353597.2-202ENST00000434901 373 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 OR52B5P-201ENST00000435337 951 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 RPL35AP21-201ENST00000437667 333 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 BTBD7P2-201ENST00000441962 620 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 KNOP1P3-201ENST00000446933 426 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 RN7SL443P-201ENST00000464331 290 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 RN7SL174P-201ENST00000475578 289 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 METTL15P1-201ENST00000481421 1045 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 RN7SL101P-201ENST00000496350 279 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC105031.1-201ENST00000518550 476 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 HIGD1AP18-201ENST00000520730 278 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AP006245.2-201ENST00000522004 300 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 OR8A2P-201ENST00000528631 952 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AL049870.4-201ENST00000555741 486 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC022884.3-201ENST00000579571 248 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC011445.2-201ENST00000599274 173 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AL021368.1-201ENST00000607490 540 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC116447.1-201ENST00000613153 453 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC079298.2-201ENST00000623885 459 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AP003400.6-201ENST00000624698 740 ntBASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM5Q96HC4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms