Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXRED1Q96CU9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXRED1Q96CU9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC079753.1-201ENST00000623243 3868 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 VPS35P1-201ENST00000563400 1518 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RNU1-59P-201ENST00000364829 162 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 Y_RNA.408-201ENST00000383987 102 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AL359694.1-201ENST00000403247 604 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 DPPA2P2-201ENST00000418220 897 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 CYP4F30P-202ENST00000420048 405 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 CDC42P6-201ENST00000421246 576 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 SKP1P3-201ENST00000429280 487 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC022022.1-201ENST00000430304 178 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RPS24P8-201ENST00000431490 402 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 OR2B8P-201ENST00000432841 938 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 TMX2P1-201ENST00000436507 708 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 ARAFP2-201ENST00000440565 559 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RPL7AP71-201ENST00000451120 739 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC010307.1-201ENST00000467206 836 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 SNRPCP3-201ENST00000474888 476 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RPL7P41-201ENST00000485823 957 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC006499.5-201ENST00000505037 514 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC106800.3-201ENST00000511389 308 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC090751.1-201ENST00000566966 267 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RN7SL208P-201ENST00000577964 296 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 MIR378C-201ENST00000578683 81 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AL390816.3-201ENST00000604527 1066 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 LSM1P2-201ENST00000604911 322 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC068276.1-201ENST00000605793 379 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC055764.2-201ENST00000610089 670 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 U1.25-201ENST00000614085 162 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 MRPL57P1-201ENST00000621486 265 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AL160394.1-201ENST00000624765 724 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 AC023245.2-201ENST00000530760 2978 ntBASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FOXRED1Q96CU9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 AL592429.1-201ENST00000403909 1473 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 AC093225.1-201ENST00000506867 1408 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 RNA5SP321-201ENST00000362722 111 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 RNU4-91P-201ENST00000364778 135 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 MIR137-201ENST00000385223 102 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 ATP5F1P4-201ENST00000397288 746 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 DEFB108C-201ENST00000400154 252 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 HMGB3P7-201ENST00000400214 611 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 RPL23AP47-201ENST00000408017 460 ntBASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.59□□□□□ -1.51
FOXRED1Q96CU9 PIGPP2-201ENST00000411569 458 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms