Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC009163.6-201ENST00000612367 342 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC015871.5-202ENST00000623252 701 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 LINC01739-205ENST00000641890 573 ntBASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.01□□□□□ -1.61
CDKL3Q8IVW4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDKL3Q8IVW4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AP002530.1-201ENST00000405705 684 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 GJA6P-201ENST00000415117 1042 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 EIF4A1P1-201ENST00000420241 934 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 AL355433.1-201ENST00000422804 300 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 RPS26P4-201ENST00000431743 355 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 TMX2P1-201ENST00000436507 708 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 RNA5SP103-201ENST00000459503 118 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 NPM1P29-201ENST00000483112 803 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 RN7SKP46-201ENST00000515942 234 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AP000919.1-201ENST00000582850 985 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AL121612.2-201ENST00000612261 482 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 AC006453.5-201ENST00000636451 619 ntBASIC5□□□□□ -1.61
CDKL3Q8IVW4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDKL3Q8IVW4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5□□□□□ -1.61
CDKL3Q8IVW4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDKL3Q8IVW4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDKL3Q8IVW4 CIR1P2-201ENST00000514821 1342 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC112255.1-201ENST00000624070 2493 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RNU1-106P-201ENST00000384382 164 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 SNORA70-201ENST00000384436 135 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 MIR1271-201ENST00000408537 86 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RNA5SP345-201ENST00000410646 108 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RN7SKP273-201ENST00000411392 314 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC013470.3-201ENST00000420252 1194 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AL451139.1-201ENST00000434718 346 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 OTX2P1-201ENST00000450956 354 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RPS26P39-201ENST00000469206 341 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 BX284632.1-201ENST00000478218 541 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC109462.1-201ENST00000491087 368 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RN7SL558P-201ENST00000497468 299 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 RN7SKP66-201ENST00000516681 231 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC090022.1-201ENST00000546569 311 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AL049839.1-201ENST00000556151 657 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC087477.6-201ENST00000559595 843 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC096553.1-201ENST00000605169 829 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC010424.2-201ENST00000607594 443 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 MIR6826-201ENST00000617808 98 ntBASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDKL3Q8IVW4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CDKL3Q8IVW4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.98□□□□□ -1.61
CDKL3Q8IVW4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDKL3Q8IVW4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.98□□□□□ -1.61
CDKL3Q8IVW4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDKL3Q8IVW4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms