Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.34□□□□□ -1.4
RHBDL3P58872 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.34□□□□□ -1.4
RHBDL3P58872 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 AP000756.2-201ENST00000624168 2567 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 AC103591.2-201ENST00000265259 766 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RHBDL3P58872 MIR105-1-201ENST00000385222 81 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AL133270.1-201ENST00000402635 279 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 PPIAP9-201ENST00000403866 498 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 NUDT19P3-201ENST00000404698 555 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 AC211486.3-201ENST00000412694 621 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 RPL23AP18-201ENST00000416139 468 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 RBMY2KP-201ENST00000418221 992 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RHBDL3P58872 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.33□□□□□ -1.4
RHBDL3P58872 AC073465.2-201ENST00000440938 498 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.33□□□□□ -1.4
RHBDL3P58872 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.33□□□□□ -1.4
RHBDL3P58872 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.33□□□□□ -1.4
RHBDL3P58872 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 OR5D15P-201ENST00000531671 942 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 AC084824.2-201ENST00000548906 345 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AC104229.1-201ENST00000561364 255 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.33□□□□□ -1.4
RHBDL3P58872 MIR4436B2-201ENST00000581415 91 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 MIR4436B1-201ENST00000583272 91 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.33□□□□□ -1.4
RHBDL3P58872 Mico1.1-201ENST00000611698 204 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 AP000943.4-201ENST00000622912 357 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 AC131971.1-201ENST00000332881 1482 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 HSPD1P11-201ENST00000508643 1702 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RHBDL3P58872 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.33□□□□□ -1.4
RHBDL3P58872 AC009229.4-201ENST00000623854 1947 ntBASIC6.33□□□□□ -1.4
RHBDL3P58872 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
RHBDL3P58872 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RHBDL3P58872 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AL445437.1-201ENST00000623157 3087 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RHBDL3P58872 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 RNU4-4P-201ENST00000364588 130 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.32□□□□□ -1.4
RHBDL3P58872 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RHBDL3P58872 RNU4-27P-201ENST00000410889 139 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 GSTM3P2-201ENST00000412746 530 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.32□□□□□ -1.4
RHBDL3P58872 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC093162.1-201ENST00000419682 124 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.32□□□□□ -1.4
RHBDL3P58872 RPL31P44-201ENST00000447680 377 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 NDUFB5P1-201ENST00000508134 564 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AC002456.2-201ENST00000509356 380 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 RN7SKP66-201ENST00000516681 231 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.32□□□□□ -1.4
RHBDL3P58872 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 OR4A43P-201ENST00000532938 908 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC092490.3-201ENST00000545370 572 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC106785.3-201ENST00000564064 847 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 TMF1P1-201ENST00000576058 373 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC005252.1-201ENST00000604518 1063 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AC244107.2-201ENST00000611773 76 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC020978.9-201ENST00000624380 1141 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC015799.1-201ENST00000622996 3122 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RHBDL3P58872 AC092747.4-201ENST00000620519 1861 ntBASIC6.32□□□□□ -1.4
RHBDL3P58872 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RHBDL3P58872 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms