Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 AC090543.1-201ENST00000492168 485 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.33□□□□□ -1.56
LIMK1P53667 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 IGBP1P5-201ENST00000507524 1000 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 FABP5P6-201ENST00000510588 409 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 SCARNA16.4-201ENST00000516956 187 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.33□□□□□ -1.56
LIMK1P53667 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 AGGF1P7-201ENST00000562369 913 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 SS18L2P2-201ENST00000583960 235 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 MIMT1-201ENST00000597105 1050 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 BMS1P7-201ENST00000602440 1052 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC034236.3-201ENST00000605999 461 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 AC015802.5-201ENST00000607478 399 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AL133481.2-203ENST00000607558 139 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC083809.1-201ENST00000615051 472 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC009704.2-201ENST00000618739 483 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC087385.3-201ENST00000620477 187 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK1P53667 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
LIMK1P53667 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK1P53667 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 DNM1P47-203ENST00000571780 12667 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 AC093535.2-201ENST00000624769 2326 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AC010329.2-201ENST00000595195 2737 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 CASC19-284ENST00000642142 1868 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AP004607.3-201ENST00000530354 3915 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AC093591.2-201ENST00000565254 3843 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AP000756.2-201ENST00000624168 2567 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 AC004817.4-201ENST00000602396 3625 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.32□□□□□ -1.56
LIMK1P53667 SNORA70.2-201ENST00000364506 135 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 RNA5SP187-201ENST00000384400 119 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 SETP15-201ENST00000412724 337 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.32□□□□□ -1.56
LIMK1P53667 DNAJC19P7-201ENST00000428811 344 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 MTND6P18-201ENST00000439477 513 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 AC234781.3-201ENST00000452540 973 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 EIF2S2P4-201ENST00000461070 984 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 NPM1P29-201ENST00000483112 803 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.32□□□□□ -1.56
LIMK1P53667 COL6A4P2-205ENST00000509855 506 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 EIF3KP3-201ENST00000514461 639 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 IGLV3-24-201ENST00000517477 197 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LIMK1P53667 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.32□□□□□ -1.56
LIMK1P53667 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.32□□□□□ -1.56
LIMK1P53667 AC209154.1-201ENST00000582156 337 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 NANOGP3-201ENST00000605855 286 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AC093799.2-201ENST00000610062 578 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AL162574.2-201ENST00000614618 657 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AL162574.1-201ENST00000615702 950 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AC245389.2-201ENST00000616023 576 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 AC242843.1-201ENST00000618702 573 ntBASIC5.32□□□□□ -1.56
LIMK1P53667 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.32□□□□□ -1.56
LIMK1P53667 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LIMK1P53667 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
LIMK1P53667 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LIMK1P53667 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
LIMK1P53667 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.32□□□□□ -1.56
LIMK1P53667 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LIMK1P53667 DDX6P1-205ENST00000441966 1436 ntBASIC5.31□□□□□ -1.56
LIMK1P53667 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIMK1P53667 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.31□□□□□ -1.56
LIMK1P53667 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIMK1P53667 AC092079.1-201ENST00000558620 1985 ntBASIC5.31□□□□□ -1.56
LIMK1P53667 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIMK1P53667 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LIMK1P53667 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LIMK1P53667 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms