Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 HSPE1P2-201ENST00000554777 306 ntBASIC5.77□□□□□ -1.49
COPAP53621 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
COPAP53621 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.77□□□□□ -1.49
COPAP53621 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.77□□□□□ -1.49
COPAP53621 AP002802.2-201ENST00000605877 235 ntBASIC5.77□□□□□ -1.49
COPAP53621 AP004607.9-201ENST00000618202 316 ntBASIC5.77□□□□□ -1.49
COPAP53621 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 AC097655.1-201ENST00000635075 318 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC083865.1-201ENST00000636634 831 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC132825.7-201ENST00000638744 335 ntBASIC5.77□□□□□ -1.49
COPAP53621 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 CASC19-248ENST00000641674 1356 ntBASIC5.77□□□□□ -1.49
COPAP53621 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
COPAP53621 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.77□□□□□ -1.49
COPAP53621 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 AL121950.1-201ENST00000624993 2077 ntBASIC5.76□□□□□ -1.49
COPAP53621 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 RNA5SP30-201ENST00000365552 115 ntBASIC5.76□□□□□ -1.49
COPAP53621 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 MIR142-201ENST00000384835 87 ntBASIC5.76□□□□□ -1.49
COPAP53621 ANAPC10P1-201ENST00000395991 556 ntBASIC5.76□□□□□ -1.49
COPAP53621 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 RN7SKP59-201ENST00000410520 314 ntBASIC5.76□□□□□ -1.49
COPAP53621 AL133173.1-201ENST00000423458 397 ntBASIC5.76□□□□□ -1.49
COPAP53621 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 MTND2P2-201ENST00000434633 945 ntBASIC5.76□□□□□ -1.49
COPAP53621 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AL450023.1-201ENST00000450868 751 ntBASIC5.76□□□□□ -1.49
COPAP53621 RANP1-206ENST00000455094 651 ntBASIC5.76□□□□□ -1.49
COPAP53621 PSMC1P13-201ENST00000458195 985 ntBASIC5.76□□□□□ -1.49
COPAP53621 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.76□□□□□ -1.49
COPAP53621 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 AC012254.4-201ENST00000588843 273 ntBASIC5.76□□□□□ -1.49
COPAP53621 AL606834.3-201ENST00000602615 496 ntBASIC5.76□□□□□ -1.49
COPAP53621 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.76□□□□□ -1.49
COPAP53621 AC023813.4-201ENST00000607580 580 ntBASIC5.76□□□□□ -1.49
COPAP53621 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 AC007786.3-201ENST00000615154 596 ntBASIC5.76□□□□□ -1.49
COPAP53621 AP002967.1-201ENST00000624203 539 ntBASIC5.76□□□□□ -1.49
COPAP53621 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 OR6C71P-202ENST00000641886 1107 ntBASIC5.76□□□□□ -1.49
COPAP53621 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COPAP53621 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
COPAP53621 AC011933.2-201ENST00000578539 2790 ntBASIC5.76□□□□□ -1.49
COPAP53621 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 ZNF733P-202ENST00000444809 1573 ntBASIC5.76□□□□□ -1.49
COPAP53621 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPAP53621 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPAP53621 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.75□□□□□ -1.49
COPAP53621 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPAP53621 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 RN7SKP145-201ENST00000363291 303 ntBASIC5.75□□□□□ -1.49
COPAP53621 RNU5E-10P-201ENST00000363506 118 ntBASIC5.75□□□□□ -1.49
COPAP53621 RNA5SP234-201ENST00000363916 119 ntBASIC5.75□□□□□ -1.49
COPAP53621 RNU6-171P-201ENST00000384354 107 ntBASIC5.75□□□□□ -1.49
COPAP53621 RNU6-244P-201ENST00000391028 104 ntBASIC5.75□□□□□ -1.49
COPAP53621 HMGB1P13-201ENST00000406019 642 ntBASIC5.75□□□□□ -1.49
COPAP53621 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.75□□□□□ -1.49
COPAP53621 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms