Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPA3P35244 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.86□□□□□ -1.63
RPA3P35244 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RPA3P35244 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPA3P35244 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.86□□□□□ -1.63
RPA3P35244 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPA3P35244 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPA3P35244 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RPA3P35244 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RPA3P35244 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.86□□□□□ -1.63
RPA3P35244 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPA3P35244 DDX18P4-201ENST00000511690 1966 ntBASIC4.85□□□□□ -1.63
RPA3P35244 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 AC068870.3-201ENST00000625077 2536 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AC026523.2-201ENST00000625039 7739 ntBASIC4.85□□□□□ -1.63
RPA3P35244 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPA3P35244 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPA3P35244 IL6STP1-201ENST00000346911 1020 ntBASIC4.85□□□□□ -1.63
RPA3P35244 SNORA70-201ENST00000384436 135 ntBASIC4.85□□□□□ -1.63
RPA3P35244 CHMP1B2P-201ENST00000399581 597 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AL357515.1-201ENST00000402967 542 ntBASIC4.85□□□□□ -1.63
RPA3P35244 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.85□□□□□ -1.63
RPA3P35244 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.85□□□□□ -1.63
RPA3P35244 NPM1P33-201ENST00000438918 872 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AL137845.2-201ENST00000444292 988 ntBASIC4.85□□□□□ -1.63
RPA3P35244 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.85□□□□□ -1.63
RPA3P35244 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 RPL7AP6-201ENST00000477943 801 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.85□□□□□ -1.63
RPA3P35244 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.85□□□□□ -1.63
RPA3P35244 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.85□□□□□ -1.63
RPA3P35244 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 AC044860.2-201ENST00000561005 179 ntBASIC4.85□□□□□ -1.63
RPA3P35244 MIR4691-201ENST00000583764 85 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AC211433.2-201ENST00000608433 387 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AC019206.1-201ENST00000621938 425 ntBASIC4.85□□□□□ -1.63
RPA3P35244 AC018445.2-201ENST00000622987 260 ntBASIC4.85□□□□□ -1.63
RPA3P35244 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPA3P35244 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPA3P35244 AL445487.1-201ENST00000415694 1580 ntBASIC4.85□□□□□ -1.63
RPA3P35244 UGT2B26P-201ENST00000508672 1613 ntBASIC4.85□□□□□ -1.63
RPA3P35244 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPA3P35244 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.85□□□□□ -1.63
RPA3P35244 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.85□□□□□ -1.63
RPA3P35244 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPA3P35244 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RPA3P35244 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.84□□□□□ -1.63
RPA3P35244 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPA3P35244 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPA3P35244 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.84□□□□□ -1.63
RPA3P35244 CASC19-255ENST00000641733 1385 ntBASIC4.84□□□□□ -1.63
RPA3P35244 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.84□□□□□ -1.63
RPA3P35244 AL021331.1-201ENST00000402817 582 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.84□□□□□ -1.63
RPA3P35244 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPA3P35244 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.84□□□□□ -1.63
RPA3P35244 AC000111.2-201ENST00000448200 210 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.84□□□□□ -1.63
RPA3P35244 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.84□□□□□ -1.63
RPA3P35244 snoU13.20-201ENST00000459180 104 ntBASIC4.84□□□□□ -1.63
RPA3P35244 RN7SL319P-201ENST00000480656 221 ntBASIC4.84□□□□□ -1.63
RPA3P35244 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RPA3P35244 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.84□□□□□ -1.63
RPA3P35244 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPA3P35244 RNA5SP43-201ENST00000516559 110 ntBASIC4.84□□□□□ -1.63
RPA3P35244 RNU6-709P-201ENST00000517257 104 ntBASIC4.84□□□□□ -1.63
RPA3P35244 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPA3P35244 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.84□□□□□ -1.63
RPA3P35244 SETP1-201ENST00000556014 845 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.84□□□□□ -1.63
RPA3P35244 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.84□□□□□ -1.63
RPA3P35244 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.84□□□□□ -1.63
RPA3P35244 AC005377.1-201ENST00000605126 456 ntBASIC4.84□□□□□ -1.63
RPA3P35244 COX6CP4-201ENST00000605798 228 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AL353600.1-201ENST00000608148 251 ntBASIC4.84□□□□□ -1.63
RPA3P35244 OR7M1P-201ENST00000608946 533 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AL627230.1-201ENST00000613077 211 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AL591926.8-201ENST00000616876 211 ntBASIC4.84□□□□□ -1.63
RPA3P35244 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.84□□□□□ -1.63
RPA3P35244 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.84□□□□□ -1.63
RPA3P35244 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RPA3P35244 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RPA3P35244 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RPA3P35244 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.84□□□□□ -1.64
RPA3P35244 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPA3P35244 AC008758.3-201ENST00000507003 1829 ntBASIC4.83□□□□□ -1.64
RPA3P35244 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPA3P35244 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.83□□□□□ -1.64
RPA3P35244 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RPA3P35244 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPA3P35244 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.83□□□□□ -1.64
RPA3P35244 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPA3P35244 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPA3P35244 RNA5SP428-201ENST00000365129 132 ntBASIC4.83□□□□□ -1.64
RPA3P35244 AL136116.2-201ENST00000404020 785 ntBASIC4.83□□□□□ -1.64
RPA3P35244 AL080315.1-201ENST00000406055 466 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms