Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CHRNA3P32297 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 AC093775.1-201ENST00000624154 1868 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.3□□□□□ -1.56
CHRNA3P32297 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CHRNA3P32297 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHRNA3P32297 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 PANDAR-201ENST00000629595 1506 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA3P32297 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
CHRNA3P32297 RNA5SP305-201ENST00000362665 119 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHRNA3P32297 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.29□□□□□ -1.56
CHRNA3P32297 RPS4XP16-201ENST00000427198 791 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA3P32297 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.29□□□□□ -1.56
CHRNA3P32297 AC073850.1-201ENST00000449243 255 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.29□□□□□ -1.56
CHRNA3P32297 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 NDUFA5P12-201ENST00000503796 343 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AC091917.2-201ENST00000505002 744 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA3P32297 RNA5SP249-201ENST00000516127 99 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.29□□□□□ -1.56
CHRNA3P32297 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHRNA3P32297 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.29□□□□□ -1.56
CHRNA3P32297 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CHRNA3P32297 AC018552.1-201ENST00000562099 811 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AC011447.4-201ENST00000587562 111 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AP005432.2-201ENST00000608162 586 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.29□□□□□ -1.56
CHRNA3P32297 AC004241.3-201ENST00000611728 517 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 BNIP3P41-202ENST00000616656 861 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AC022106.2-201ENST00000620114 757 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 AP002799.1-201ENST00000623552 423 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.29□□□□□ -1.56
CHRNA3P32297 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHRNA3P32297 HSPA8P18-201ENST00000439846 1928 ntBASIC5.29□□□□□ -1.56
CHRNA3P32297 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC027228.2-201ENST00000567141 2154 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 RN7SKP113-201ENST00000363891 295 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 UBBP2-201ENST00000376781 231 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 TRIM60P17-201ENST00000415181 719 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 TMBIM7P-201ENST00000418074 855 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 OR51A6P-201ENST00000418680 1004 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AC093162.1-201ENST00000419682 124 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 EI24P4-201ENST00000423683 1078 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 MTND4LP13-201ENST00000425022 298 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC092647.2-201ENST00000452998 253 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 RPL31P53-201ENST00000457065 348 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AC090114.3-201ENST00000479267 829 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC147055.1-201ENST00000509261 750 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 RPS27AP18-201ENST00000515536 459 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AC092490.3-201ENST00000545370 572 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AL049830.4-201ENST00000555149 351 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 MIR8069-1-201ENST00000616627 86 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 MIR8069-2-201ENST00000621412 86 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 AC093849.1-201ENST00000563631 2209 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CHRNA3P32297 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHRNA3P32297 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.28□□□□□ -1.56
CHRNA3P32297 VPS35P1-201ENST00000563400 1518 ntBASIC5.28□□□□□ -1.56
CHRNA3P32297 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms