Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 GTF3AP5-201ENST00000442645 697 ntBASIC7.11□□□□□ -1.27
LIG1P18858 EEF1B2P3-201ENST00000447718 678 ntBASIC7.11□□□□□ -1.27
LIG1P18858 RPL5P32-201ENST00000454085 879 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AC011979.1-201ENST00000472300 483 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AL117692.1-201ENST00000494283 713 ntBASIC7.11□□□□□ -1.27
LIG1P18858 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.11□□□□□ -1.27
LIG1P18858 AC104090.1-201ENST00000506341 1171 ntBASIC7.11□□□□□ -1.27
LIG1P18858 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 AC113430.1-201ENST00000506872 718 ntBASIC7.11□□□□□ -1.27
LIG1P18858 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.11□□□□□ -1.27
LIG1P18858 IGKV2-19-201ENST00000518132 283 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.11□□□□□ -1.27
LIG1P18858 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.11□□□□□ -1.27
LIG1P18858 AP000619.3-201ENST00000535634 1127 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.11□□□□□ -1.27
LIG1P18858 AC009729.1-201ENST00000548873 1133 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 SERPINE4P-201ENST00000554978 281 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 AC245505.1-201ENST00000556398 224 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MT1CP-201ENST00000567054 174 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AC005332.4-201ENST00000592752 579 ntBASIC7.11□□□□□ -1.27
LIG1P18858 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 BMS1P7-201ENST00000602440 1052 ntBASIC7.11□□□□□ -1.27
LIG1P18858 WISP1-OT1-201ENST00000602893 642 ntBASIC7.11□□□□□ -1.27
LIG1P18858 MTCYBP22-201ENST00000603788 447 ntBASIC7.11□□□□□ -1.27
LIG1P18858 AL392112.1-201ENST00000605115 829 ntBASIC7.11□□□□□ -1.27
LIG1P18858 LARP7P1-201ENST00000605576 316 ntBASIC7.11□□□□□ -1.27
LIG1P18858 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
LIG1P18858 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.11□□□□□ -1.27
LIG1P18858 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LIG1P18858 AL731532.1-201ENST00000623972 4236 ntBASIC7.1□□□□□ -1.27
LIG1P18858 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 AL391994.1-201ENST00000254724 282 ntBASIC7.1□□□□□ -1.27
LIG1P18858 Y_RNA.41-201ENST00000362646 102 ntBASIC7.1□□□□□ -1.27
LIG1P18858 RPL10P10-201ENST00000403509 664 ntBASIC7.1□□□□□ -1.27
LIG1P18858 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 RPL26P37-201ENST00000411983 438 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 OSTCP4-201ENST00000424397 449 ntBASIC7.1□□□□□ -1.27
LIG1P18858 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.1□□□□□ -1.27
LIG1P18858 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 AL590004.3-202ENST00000445883 451 ntBASIC7.1□□□□□ -1.27
LIG1P18858 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 RPL35AP19-201ENST00000469425 329 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC106822.1-201ENST00000502647 526 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC116353.2-201ENST00000505332 712 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.1□□□□□ -1.27
LIG1P18858 DUXAP2-201ENST00000519198 589 ntBASIC7.1□□□□□ -1.27
LIG1P18858 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
LIG1P18858 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.1□□□□□ -1.27
LIG1P18858 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.1□□□□□ -1.27
LIG1P18858 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.1□□□□□ -1.27
LIG1P18858 AC121758.1-202ENST00000556917 658 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC023968.1-201ENST00000560719 475 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.1□□□□□ -1.27
LIG1P18858 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.1□□□□□ -1.27
LIG1P18858 ELOCP28-201ENST00000590044 317 ntBASIC7.1□□□□□ -1.27
LIG1P18858 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 AC009779.8-202ENST00000607990 932 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC010435.1-201ENST00000623353 1177 ntBASIC7.1□□□□□ -1.27
LIG1P18858 AC022140.2-201ENST00000623500 188 ntBASIC7.1□□□□□ -1.27
LIG1P18858 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.1□□□□□ -1.27
LIG1P18858 AC099654.6-201ENST00000636487 512 ntBASIC7.1□□□□□ -1.27
LIG1P18858 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.1□□□□□ -1.27
LIG1P18858 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
LIG1P18858 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 AC123769.1-201ENST00000530992 3192 ntBASIC7.1□□□□□ -1.27
LIG1P18858 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LIG1P18858 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
LIG1P18858 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
LIG1P18858 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LIG1P18858 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms