Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL3L1P16619 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 OR9K1P-202ENST00000641111 3217 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 AL359922.3-201ENST00000624779 1670 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 RNA5SP87-201ENST00000384155 118 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AL133270.1-201ENST00000402635 279 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 AL080315.1-201ENST00000406055 466 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 RPL7P57-201ENST00000423238 740 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 RPS26P4-201ENST00000431743 355 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL3L1P16619 CYCSP11-201ENST00000436426 315 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AC016831.4-201ENST00000438302 307 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL3L1P16619 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.88□□□□□ -1.79
CCL3L1P16619 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL3L1P16619 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL3L1P16619 RN7SL652P-201ENST00000577769 300 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 AC011815.3-201ENST00000624194 473 ntBASIC3.88□□□□□ -1.79
CCL3L1P16619 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCL3L1P16619 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL3L1P16619 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CCL3L1P16619 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL3L1P16619 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 AC003985.2-201ENST00000562268 1669 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCL3L1P16619 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCL3L1P16619 NCOA4P2-201ENST00000340589 1813 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCL3L1P16619 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 U3.23-201ENST00000391132 200 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 AL592291.1-201ENST00000403830 352 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.87□□□□□ -1.79
CCL3L1P16619 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 RPL36AP10-201ENST00000421785 322 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.87□□□□□ -1.79
CCL3L1P16619 AC097523.2-201ENST00000435551 652 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 AL136455.1-201ENST00000441083 1240 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.87□□□□□ -1.79
CCL3L1P16619 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.87□□□□□ -1.79
CCL3L1P16619 AC090142.1-201ENST00000465776 462 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 AC020890.1-201ENST00000491837 504 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 AL671862.1-201ENST00000515851 349 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.87□□□□□ -1.79
CCL3L1P16619 AL110118.1-201ENST00000553543 400 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 MIR4270-201ENST00000581799 70 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 AC004948.1-201ENST00000609858 672 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 AC138965.3-201ENST00000623875 498 ntBASIC3.87□□□□□ -1.79
CCL3L1P16619 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
CCL3L1P16619 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCL3L1P16619 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CCL3L1P16619 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
CCL3L1P16619 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCL3L1P16619 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC3.86□□□□□ -1.79
CCL3L1P16619 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCL3L1P16619 AL672167.1-203ENST00000641299 2975 ntBASIC3.86□□□□□ -1.79
CCL3L1P16619 AC103591.2-201ENST00000265259 766 ntBASIC3.86□□□□□ -1.79
CCL3L1P16619 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms