Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC079148.1-201ENST00000565944 819 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC009852.2-201ENST00000567898 485 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AL158211.2-201ENST00000607282 395 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC010632.3-201ENST00000611377 369 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC138965.3-201ENST00000623875 498 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC021106.3-201ENST00000623925 531 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 NXF4-202ENST00000416098 1465 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC097461.1-201ENST00000568928 2821 ntBASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RAB40ALP0C0E4 MTCO1P15-201ENST00000529569 1526 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 VPS35P1-201ENST00000563400 1518 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 THAP12P4-201ENST00000528321 2266 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC092747.4-201ENST00000620519 1861 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 RNU1-146P-201ENST00000364015 165 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 RNU4-4P-201ENST00000364588 130 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 MIR600-201ENST00000385007 98 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 ARL2BPP3-201ENST00000421226 480 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 HSPE1P16-201ENST00000426640 348 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 PSMC1P13-201ENST00000458195 985 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC097484.1-201ENST00000471148 389 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC037198.2-201ENST00000478845 733 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC058823.1-201ENST00000485315 474 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 RPL23AP73-201ENST00000492507 471 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 RNU6-1308P-201ENST00000516817 103 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC012400.1-201ENST00000518452 381 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AP001922.4-201ENST00000526967 290 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 OR4R2P-201ENST00000530815 597 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 OR8X1P-201ENST00000534542 869 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC093014.1-201ENST00000548926 724 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 OR11H3P-201ENST00000554547 982 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 MIR4675-201ENST00000577898 77 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AP000769.2-201ENST00000602344 396 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC073575.2-201ENST00000614212 627 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 MIR1264-201ENST00000616374 69 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC074140.1-201ENST00000621617 208 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC135068.5-201ENST00000624197 983 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 AC135068.12-201ENST00000637370 931 ntBASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAB40ALP0C0E4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms