Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 AC067773.1-201ENST00000603284 1094 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 AC025262.3-201ENST00000623666 360 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CXCL1P09341 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
CXCL1P09341 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL1P09341 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL1P09341 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CXCL1P09341 KARSP3-201ENST00000571212 1504 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 DDX18P3-201ENST00000404856 2007 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL1P09341 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CXCL1P09341 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL1P09341 RNA5SP234-201ENST00000363916 119 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 RNU1-43P-201ENST00000365052 165 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL1P09341 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL1P09341 RPL23AP48-201ENST00000406913 488 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 VN1R8P-201ENST00000407739 893 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 RN7SKP240-201ENST00000410583 375 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL1P09341 GEMIN8P3-201ENST00000445417 720 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 HMGB1P4-201ENST00000455362 567 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 PSMC1P13-201ENST00000458195 985 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL1P09341 AC108022.1-201ENST00000493466 478 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 UGT2A3P7-201ENST00000510485 734 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 AC026688.1-201ENST00000520639 1168 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 IFITM8P-201ENST00000522529 394 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL1P09341 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL1P09341 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL1P09341 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL1P09341 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL1P09341 RPSAP73-201ENST00000614820 330 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL1P09341 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL1P09341 AC012414.7-202ENST00000622705 1090 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 SAMMSON-209ENST00000641222 1100 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL1P09341 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CXCL1P09341 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL1P09341 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL1P09341 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL1P09341 MAPK10-304ENST00000641341 3984 ntBASIC3.7□□□□□ -1.82
CXCL1P09341 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.69□□□□□ -1.82
CXCL1P09341 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 OR56A4-201ENST00000330728 1209 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 AC067945.1-201ENST00000342609 618 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 RNU1-149P-201ENST00000390870 161 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 SNORA68.2-201ENST00000391263 128 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 ATP5HP3-201ENST00000396994 486 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 HMGB3P7-201ENST00000400214 611 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 GAPDHP49-201ENST00000421421 961 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC079807.1-201ENST00000429993 481 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC110602.1-201ENST00000437414 318 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AL354714.3-201ENST00000447284 493 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 AL133477.1-201ENST00000457472 514 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC098583.1-201ENST00000480875 255 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 RPS4XP20-201ENST00000505751 772 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 AC015912.2-201ENST00000571053 181 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms