Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.61□□□□□ -1.19
RAPGEF3O95398 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
RAPGEF3O95398 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RAPGEF3O95398 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RAPGEF3O95398 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.61□□□□□ -1.19
RAPGEF3O95398 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.61□□□□□ -1.19
RAPGEF3O95398 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
RAPGEF3O95398 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RAPGEF3O95398 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.61□□□□□ -1.19
RAPGEF3O95398 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AP000641.1-201ENST00000531988 1639 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 SNORD113.2-201ENST00000364166 89 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AL353692.2-201ENST00000407054 335 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 XKRY2-201ENST00000442362 1093 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 MTATP6P14-201ENST00000455189 673 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 AP002345.1-201ENST00000456493 928 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC108729.2-201ENST00000476543 840 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC096754.1-201ENST00000508904 818 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 NPM1P42-201ENST00000560329 862 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC034105.4-201ENST00000568304 277 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 MIR3939-201ENST00000582614 106 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 HMGB1P51-201ENST00000605166 638 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC109809.1-201ENST00000619665 545 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC079298.2-201ENST00000623885 459 ntBASIC7.6□□□□□ -1.19
RAPGEF3O95398 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RAPGEF3O95398 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RAPGEF3O95398 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 MAPK10-270ENST00000641102 3538 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 OR4K17-201ENST00000315543 1032 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 RNU1-85P-201ENST00000364127 164 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AL359837.1-201ENST00000381357 287 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 AL121977.1-201ENST00000401636 979 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC069282.1-201ENST00000411911 526 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 MRPS21P2-201ENST00000424704 264 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC109327.1-201ENST00000471666 403 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AP000619.2-201ENST00000546014 969 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC133555.2-201ENST00000550213 292 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 VN1R85P-201ENST00000601587 426 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC008993.2-201ENST00000631744 806 ntBASIC7.59□□□□□ -1.19
RAPGEF3O95398 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.59□□□□□ -1.19
RAPGEF3O95398 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RAPGEF3O95398 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RAPGEF3O95398 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.2
RAPGEF3O95398 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AL627171.1-201ENST00000618845 1308 ntBASIC7.58□□□□□ -1.2
RAPGEF3O95398 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RAPGEF3O95398 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RAPGEF3O95398 RNU6-650P-201ENST00000365658 111 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms