Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 RPL7AP61-201ENST00000443410 636 ntBASIC2.06□□□□□ -2.08
USH2AO75445 AC053481.1-201ENST00000467217 306 ntBASIC2.06□□□□□ -2.08
USH2AO75445 PARP4P3-201ENST00000510265 317 ntBASIC2.06□□□□□ -2.08
USH2AO75445 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC2.06□□□□□ -2.08
USH2AO75445 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC2.06□□□□□ -2.08
USH2AO75445 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.06□□□□□ -2.08
USH2AO75445 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.06□□□□□ -2.08
USH2AO75445 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC2.06□□□□□ -2.08
USH2AO75445 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC2.06□□□□□ -2.08
USH2AO75445 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC2.06□□□□□ -2.08
USH2AO75445 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
USH2AO75445 SNORA5A-201ENST00000384111 134 ntBASIC2.05□□□□□ -2.08
USH2AO75445 RNVU1-14-201ENST00000384770 164 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AL590704.1-201ENST00000402856 794 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AL390316.1-201ENST00000406279 553 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AL136126.1-201ENST00000473603 402 ntBASIC2.05□□□□□ -2.08
USH2AO75445 RN7SL293P-201ENST00000481765 281 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 RNU6-237P-201ENST00000515985 71 ntBASIC2.05□□□□□ -2.08
USH2AO75445 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.05□□□□□ -2.08
USH2AO75445 OR5BC1P-201ENST00000529327 739 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AC010487.1-201ENST00000594408 1172 ntBASIC2.05□□□□□ -2.08
USH2AO75445 SRGNP1-201ENST00000603392 451 ntBASIC2.05□□□□□ -2.08
USH2AO75445 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 AP001157.1-201ENST00000550837 2339 ntBASIC2.05□□□□□ -2.08
USH2AO75445 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 HSPD1P8-201ENST00000400121 1658 ntBASIC2.05□□□□□ -2.08
USH2AO75445 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.05□□□□□ -2.08
USH2AO75445 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC2.05□□□□□ -2.08
USH2AO75445 AC009238.2-201ENST00000431026 355 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 LINC02210-201ENST00000444561 288 ntBASIC2.05□□□□□ -2.08
USH2AO75445 PPIAP3-201ENST00000450588 505 ntBASIC2.05□□□□□ -2.08
USH2AO75445 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.05□□□□□ -2.08
USH2AO75445 RPL6P9-201ENST00000466502 859 ntBASIC2.05□□□□□ -2.08
USH2AO75445 MTND6P6-201ENST00000478031 263 ntBASIC2.05□□□□□ -2.08
USH2AO75445 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.08
USH2AO75445 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC2.05□□□□□ -2.08
USH2AO75445 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USH2AO75445 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 COX6CP15-201ENST00000426313 211 ntBASIC2.05□□□□□ -2.08
USH2AO75445 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 H2AFZP5-201ENST00000446960 382 ntBASIC2.05□□□□□ -2.08
USH2AO75445 EIF2S2P5-201ENST00000457635 968 ntBASIC2.05□□□□□ -2.08
USH2AO75445 RPL5P24-201ENST00000463742 885 ntBASIC2.05□□□□□ -2.08
USH2AO75445 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 SETP14-201ENST00000497538 873 ntBASIC2.05□□□□□ -2.08
USH2AO75445 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.05□□□□□ -2.08
USH2AO75445 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USH2AO75445 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 ZNF285B-201ENST00000561698 1767 ntBASIC2.05□□□□□ -2.08
USH2AO75445 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.08
USH2AO75445 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.05□□□□□ -2.08
USH2AO75445 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USH2AO75445 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
USH2AO75445 IL6STP1-201ENST00000346911 1020 ntBASIC2.05□□□□□ -2.08
USH2AO75445 MIR383-201ENST00000362257 73 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms