Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ACTG1P13-201ENST00000486987 1043 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC004453.1-201ENST00000487895 408 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.86□□□□□ -1.31
SOX1O00570 RNU6-1334P-201ENST00000516032 105 ntBASIC6.86□□□□□ -1.31
SOX1O00570 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.86□□□□□ -1.31
SOX1O00570 IGHV3-32-201ENST00000519182 355 ntBASIC6.86□□□□□ -1.31
SOX1O00570 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.86□□□□□ -1.31
SOX1O00570 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
SOX1O00570 MIR3135A-201ENST00000578460 77 ntBASIC6.86□□□□□ -1.31
SOX1O00570 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 AC012065.4-201ENST00000602445 679 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC104785.1-201ENST00000603220 588 ntBASIC6.86□□□□□ -1.31
SOX1O00570 IMMP1LP3-201ENST00000604197 224 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC104458.1-201ENST00000608243 463 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 AC090510.2-201ENST00000617465 629 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC025162.2-201ENST00000619602 560 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AL136228.1-201ENST00000622221 319 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC004836.1-201ENST00000623032 634 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC007342.8-201ENST00000623278 678 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AL691477.1-201ENST00000624398 162 ntBASIC6.86□□□□□ -1.31
SOX1O00570 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 MIR3688-2-201ENST00000636963 87 ntBASIC6.86□□□□□ -1.31
SOX1O00570 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.86□□□□□ -1.31
SOX1O00570 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.86□□□□□ -1.31
SOX1O00570 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
SOX1O00570 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SOX1O00570 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.85□□□□□ -1.31
SOX1O00570 AL391261.1-201ENST00000555712 1479 ntBASIC6.85□□□□□ -1.31
SOX1O00570 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX1O00570 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 MTND4P16-201ENST00000466108 1367 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC007998.4-201ENST00000612496 2533 ntBASIC6.85□□□□□ -1.31
SOX1O00570 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 ZNF101P1-201ENST00000435701 1720 ntBASIC6.85□□□□□ -1.31
SOX1O00570 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
SOX1O00570 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 AC003985.2-201ENST00000562268 1669 ntBASIC6.85□□□□□ -1.31
SOX1O00570 OR51A10P-201ENST00000307165 937 ntBASIC6.85□□□□□ -1.31
SOX1O00570 ARL4AP5-201ENST00000404372 599 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AL590002.1-201ENST00000406554 418 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 NUP35P2-201ENST00000416748 943 ntBASIC6.85□□□□□ -1.31
SOX1O00570 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX1O00570 DNAJA1P6-201ENST00000437347 354 ntBASIC6.85□□□□□ -1.31
SOX1O00570 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX1O00570 AC092427.1-201ENST00000439177 601 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX1O00570 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX1O00570 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 AC009220.1-201ENST00000451614 275 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC002553.3-201ENST00000453002 341 ntBASIC6.85□□□□□ -1.31
SOX1O00570 RN7SL643P-201ENST00000471845 291 ntBASIC6.85□□□□□ -1.31
SOX1O00570 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX1O00570 RPS4XP15-201ENST00000489210 795 ntBASIC6.85□□□□□ -1.31
SOX1O00570 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.85□□□□□ -1.31
SOX1O00570 AC022483.1-201ENST00000514020 567 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX1O00570 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.85□□□□□ -1.31
SOX1O00570 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.85□□□□□ -1.31
SOX1O00570 NIFKP8-201ENST00000560500 874 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX1O00570 AC004232.1-201ENST00000571388 208 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC127024.5-201ENST00000580085 462 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 AC006504.3-201ENST00000586818 523 ntBASIC6.85□□□□□ -1.31
SOX1O00570 COX6CP7-201ENST00000597056 208 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.85□□□□□ -1.31
SOX1O00570 AL365503.1-201ENST00000605247 905 ntBASIC6.85□□□□□ -1.31
SOX1O00570 AC087045.1-201ENST00000605856 382 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms